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71_012_scaffold_376

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_376_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..1845)
DNA (1845bp) protein (615aa)
Endo-alpha-N-acetylgalactosaminidase, cellwall anchor protein family {ECO:0000313|EMBL:KFI42369.1}; EC=3.2.1.97 {ECO:0000313|EMBL:KFI42369.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
F5/8 type C domain protein n=3 Tax=Bifidobacterium bifidum RepID=U2BWS8_BIFBI
multiple sugar recognition domains
71_012_scaffold_376_2
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2351..3382)
DNA (1032bp) protein (344aa)
Putative phosphodiesterase n=2 Tax=Bifidobacterium RepID=I3WG29_BIFBI
putative phosphodiesterase
Putative phosphodiesterase {ECO:0000313|EMBL:CDB24199.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
71_012_scaffold_376_3
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3412..4557)
DNA (1146bp) protein (382aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
ddlA; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4]
D-alanine--D-alanine ligase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6HDJ7_9BIFI
71_012_scaffold_376_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4793..5788)
DNA (996bp) protein (332aa)
gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)(+)); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=4 Tax=Bifidobacterium bifidum RepID=E3ENJ5_BIFBS
71_012_scaffold_376_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5909..6793)
DNA (885bp) protein (295aa)
Phospholipid/glycerol acyltransferase n=6 Tax=Bifidobacterium RepID=E3ENJ4_BIFBS
phospholipid/glycerol acyltransferase
PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:KFI42365.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
71_012_scaffold_376_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6898..7740)
DNA (843bp) protein (281aa)
Transcription termination/antitermination protein NusG n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V7N5_BIFBI
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
nusG; transcription antitermination factor NusG; K02601 transcriptional antiterminator NusG
71_012_scaffold_376_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7770..7997)
DNA (228bp) protein (76aa)
Protein translocase subunit SecE n=6 Tax=Bifidobacterium RepID=E3ENJ2_BIFBS
secE; preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
71_012_scaffold_376_trna_1
unknown

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comp(8033..8105)
DNA (73bp)
transferRNA Trp
71_012_scaffold_376_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8286..9491)
DNA (1206bp) protein (402aa)
Aminotransferase n=3 Tax=Bifidobacterium RepID=E3ENJ1_BIFBS
aspC1; aminotransferase
Aminotransferase {ECO:0000313|EMBL:ADO52483.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
71_012_scaffold_376_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9579..10709)
DNA (1131bp) protein (377aa)
proB; glutamate 5-kinase ProB (EC:2.7.2.11); K00931 glutamate 5-kinase [EC:2.7.2.11]
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Glutamate 5-kinase n=5 Tax=Bifidobacterium RepID=E3ENJ0_BIFBS
71_012_scaffold_376_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10901..12586)
DNA (1686bp) protein (562aa)
GTPase Obg n=2 Tax=Bifidobacterium bifidum RepID=E4NZ08_BIFBP
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
obgE; GTP-binding protein, GTP1/OBG family ObgE; K03979 GTP-binding protein
Displaying 11 items

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