ggKbase home page

71_012_scaffold_549

Search features with annotation key words

Displaying 8 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_549_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..290
DNA (288bp) protein (96aa)
Ribosome-binding factor A n=7 Tax=Bifidobacterium RepID=E4NZ24_BIFBP
rbfA; ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
71_012_scaffold_549_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

333..1625
DNA (1293bp) protein (431aa)
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25]
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
tRNA pseudouridine synthase B n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NYU7_BIFBP
71_012_scaffold_549_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1906..3165
DNA (1260bp) protein (420aa)
ribF; riboflavin kinase/FMN adenylyltransferase (EC:2.7.7.2); K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
RibF Riboflavin kinase/FMN adenylyltransferase n=3 Tax=Bifidobacterium bifidum RepID=E4NYU6_BIFBP
Riboflavin kinase {ECO:0000313|EMBL:ERI83450.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
71_012_scaffold_549_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3307..4707)
DNA (1401bp) protein (467aa)
DNA repair protein radA n=5 Tax=Bifidobacterium RepID=E4NYU5_BIFBP
radA; DNA repair protein RadA; K04485 DNA repair protein RadA/Sms
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
71_012_scaffold_549_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4793..5422
DNA (630bp) protein (210aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=K2MXU1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ98719.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
71_012_scaffold_549_6
Bifidobacterium bohemicum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5547..5636
DNA (90bp) protein (30aa)
Uncharacterized protein n=7 Tax=Bifidobacteriaceae RepID=I3WJM7_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI44911.1}; TaxID=1437606 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bohemicum DSM 22767.;"
71_012_scaffold_549_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5804..6502)
DNA (699bp) protein (233aa)
rpi; ribose 5-phosphate isomerase A; K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6]
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Ribose-5-phosphate isomerase A n=7 Tax=Bifidobacterium bifidum RepID=E3ER93_BIFBS
71_012_scaffold_549_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6652..7695)
DNA (1044bp) protein (348aa)
rnhA; ribonuclease H (EC:3.1.26.4)
Rnh Ribonuclease HI n=3 Tax=Bifidobacterium bifidum RepID=E4NYU2_BIFBP
Ribonuclease H {ECO:0000313|EMBL:BAQ98717.1}; Ribonuclease HI {ECO:0000313|EMBL:ERI83455.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Displaying 8 items

View Taxonomy