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71_012_scaffold_596

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_596_1
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..1285)
DNA (1284bp) protein (428aa)
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXF1_BIFBP
71_012_scaffold_596_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1293..2360)
DNA (1068bp) protein (356aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
Phenylalanine--tRNA ligase alpha subunit n=8 Tax=Bifidobacterium RepID=E3ER39_BIFBS
71_012_scaffold_596_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2449..3288)
DNA (840bp) protein (280aa)
RNA methyltransferase, TrmH family n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VAA2_BIFBI
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EFR50544.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
putative rRNA methylase
71_012_scaffold_596_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3497..4219
DNA (723bp) protein (241aa)
ABC transporter ATP-binding protein (EC:3.6.3.42); K02068 putative ABC transport system ATP-binding protein
ATP-binding protein of ABC transporter system n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXF4_BIFBP
ABC transporter ATP-binding component {ECO:0000313|EMBL:BAQ98360.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
71_012_scaffold_596_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4216..5007
DNA (792bp) protein (264aa)
TIGR00245 family protein n=3 Tax=Bifidobacterium bifidum RepID=E4VAA4_BIFBI
ABC transporter permease component {ECO:0000313|EMBL:BAQ98361.1}; TIGR00245 family protein {ECO:0000313|EMBL:ERI83767.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein; K02069 putative ABC transport system permease protein
71_012_scaffold_596_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5068..5337)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CI92_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI83768.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
short-chain alcohol dehydrogenase
71_012_scaffold_596_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5435..5611)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HSL3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50428.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
71_012_scaffold_596_8
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5854..6315
DNA (462bp) protein (154aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=I3WIH8_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB23267.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
71_012_scaffold_596_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6428..6889)
DNA (462bp) protein (154aa)
PyrP Uracil permease n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXF7_BIFBP
pyrP; uracil permease PyrP
Putative permease {ECO:0000313|EMBL:ERI83771.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Displaying 9 items

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