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71_012_scaffold_188

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_188_1
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2..583
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LNV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEW97245.1}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
tricarboxylate-binding protein
71_012_scaffold_188_2
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

716..1174
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LNW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEW97246.1}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
hypothetical protein
71_012_scaffold_188_3
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1187..2698
DNA (1512bp) protein (504aa)
Membrane protein n=2 Tax=Dialister RepID=C9LNW1_9FIRM
Tricarboxylate transporter family protein {ECO:0000313|EMBL:CCZ55309.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
hypothetical protein; K07793 putative tricarboxylic transport membrane protein
71_012_scaffold_188_4
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2788..3522)
DNA (735bp) protein (245aa)
Probable transcriptional regulatory protein GCWU000321_01838 n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQK6_9FIRM
Probable transcriptional regulatory protein GCWU000321_01838 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
conserved hypothetical protein TIGR01033
71_012_scaffold_188_5
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3524..4108)
DNA (585bp) protein (195aa)
tRNA (Guanine-N1)-methyltransferase n=1 Tax=Dialister invisus CAG:218 RepID=R5TAQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEW97841.1}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
hypothetical protein
71_012_scaffold_188_6
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4108..4854)
DNA (747bp) protein (249aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
tRNA (guanine-N(1)-)-methyltransferase; K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Dialister invisus CAG:218 RepID=R5STN5_9FIRM
71_012_scaffold_188_7
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4856..5383)
DNA (528bp) protein (176aa)
Ribosome maturation factor RimM n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQK3_9FIRM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM
71_012_scaffold_188_8
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5355..5762)
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Dialister RepID=C9LQK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ54173.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
hypothetical protein
71_012_scaffold_188_9
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5774..6001)
DNA (228bp) protein (76aa)
UPF0109 protein GCWU000321_01833 n=2 Tax=Dialister RepID=C9LQK1_9FIRM
UPF0109 protein GCWU000321_01833 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
RNA-binding protein; K06960
71_012_scaffold_188_10
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(6014..6277)
DNA (264bp) protein (88aa)
30S ribosomal protein S16 n=2 Tax=Dialister RepID=C9LQK0_9FIRM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
rpsP; putative 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16
71_012_scaffold_188_11
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(6381..7745)
DNA (1365bp) protein (455aa)
Signal recognition particle protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQJ9_9FIRM
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
signal recognition particle protein; K03106 signal recognition particle subunit SRP54
71_012_scaffold_188_12
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7755..8078)
DNA (324bp) protein (108aa)
UPF0122 protein GCWU000321_01830 n=2 Tax=Dialister RepID=C9LQJ8_9FIRM
UPF0122 protein BN540_00464 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
hypothetical protein; K09787 hypothetical protein
71_012_scaffold_188_13
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8172..9311)
DNA (1140bp) protein (380aa)
Peptidase M20/M25/M40 family n=1 Tax=Dialister invisus CAG:218 RepID=R5T3C6_9FIRM
Peptidase M20/M25/M40 family {ECO:0000313|EMBL:CCZ53451.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
peptidase T-like protein
71_012_scaffold_188_14
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9361..10530)
DNA (1170bp) protein (390aa)
alanine racemase; K01775 alanine racemase [EC:5.1.1.1]
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Alanine racemase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T5Z4_ROSHA
71_012_scaffold_188_15
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10612..11766)
DNA (1155bp) protein (385aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
DNA polymerase IV; K02346 DNA polymerase IV [EC:2.7.7.7]
DNA polymerase IV n=1 Tax=Dialister invisus CAG:218 RepID=R5T8N7_9FIRM
71_012_scaffold_188_16
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11900..12406
DNA (507bp) protein (169aa)
Flavodoxin family protein n=1 Tax=Dialister invisus CAG:218 RepID=R5SK10_9FIRM
Flavodoxin family protein {ECO:0000313|EMBL:CCZ53453.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
flavodoxin family protein
71_012_scaffold_188_17
unknown

Not on your lists

comp(12325..12510)
DNA (186bp) protein (62aa)

This feature has no annotations

71_012_scaffold_188_18
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12598..12966
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=Dialister RepID=R5SRJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ53454.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator
71_012_scaffold_188_19
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13467..14108)
DNA (642bp) protein (214aa)
Cell-division initiation protein n=1 Tax=Dialister invisus CAG:218 RepID=R5T9B8_9FIRM
Cell-division initiation protein {ECO:0000313|EMBL:CCZ53667.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
septum site-determining protein divIVA; K04074 cell division initiation protein
71_012_scaffold_188_20
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14139..14930)
DNA (792bp) protein (264aa)
S4 domain protein n=1 Tax=Dialister invisus CAG:218 RepID=R5T3Y4_9FIRM
S4 domain protein {ECO:0000313|EMBL:CCZ53666.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
S4 domain protein
71_012_scaffold_188_21
Dialister succinatiphilus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14927..15724)
DNA (798bp) protein (266aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=742743 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister succinatiphilus YIT 11850.;"
pyrroline-5-carboxylate reductase; K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2]
Pyrroline-5-carboxylate reductase n=1 Tax=Dialister succinatiphilus YIT 11850 RepID=H1D2I4_9FIRM
71_012_scaffold_188_22
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15721..16161)
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Dialister RepID=C9LQI7_9FIRM
YlmF protein {ECO:0000313|EMBL:CCZ53664.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
71_012_scaffold_188_23
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16162..16623)
DNA (462bp) protein (154aa)
Cell division protein SepF n=2 Tax=Dialister RepID=C9LQI6_9FIRM
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
hypothetical protein; K09772 cell division inhibitor SepF
71_012_scaffold_188_24
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16620..17318)
DNA (699bp) protein (233aa)
Pyridoxal phosphate enzyme, YggS family n=2 Tax=Dialister RepID=C9LQI5_9FIRM
Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:EEW97821.1}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
pyridoxal phosphate enzyme; K06997
71_012_scaffold_188_25
Dialister succinatiphilus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17492..18487)
DNA (996bp) protein (332aa)
Putative uncharacterized protein n=1 Tax=Dialister succinatiphilus YIT 11850 RepID=H1D2I0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO62277.1}; TaxID=742743 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister succinatiphilus YIT 11850.;"
hypothetical protein; K01989 putative ABC transport system substrate-binding protein
71_012_scaffold_188_26
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18983..19990)
DNA (1008bp) protein (336aa)
TRAP transporter solute receptor, TAXI family n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQG0_9FIRM
TRAP transporter solute receptor, TAXI family {ECO:0000313|EMBL:EEW97796.1}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
TRAP transporter solute receptor, TAXI family; K07080
71_012_scaffold_188_27
Dialister sp. CAG:486, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20055..22010)
DNA (1956bp) protein (652aa)
TRAP transporter 4TM/12TM fusion protein n=1 Tax=Dialister sp. CAG:486 RepID=R6ALI7_9FIRM
TRAP transporter 4TM/12TM fusion protein {ECO:0000313|EMBL:CDA49629.1}; TaxID=1262870 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:486.;"
TRAP transporter 4TM/12TM fusion protein
71_012_scaffold_188_28
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22179..23552)
DNA (1374bp) protein (458aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
M18 family aminopeptidase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQF8_9FIRM
peptidase M18
71_012_scaffold_188_29
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23650..23775)
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEW97793.1}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
71_012_scaffold_188_30
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23785..24936)
DNA (1152bp) protein (384aa)
sodium ion-translocating decarboxylase subunit beta (EC:4.1.1.70); K01572 oxaloacetate decarboxylase, beta subunit [EC:4.1.1.3]
Sodium ion-translocating decarboxylase, beta subunit n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQF6_9FIRM
Methylmalonyl-CoA decarboxylase beta subunit {ECO:0000313|EMBL:CCZ52931.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
Displaying items 1-30 of 35 in total

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