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71_012_scaffold_276

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_276_1
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3..2789
DNA (2787bp) protein (929aa)
Helicase C-terminal domain protein n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LE95_9FIRM
Helicase C-terminal domain protein {ECO:0000313|EMBL:EFY04839.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
helicase
71_012_scaffold_276_2
Coriobacterium glomerans, Coriobacterium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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2945..3328
DNA (384bp) protein (128aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K03502 DNA polymerase V
DNA-directed DNA polymerase {ECO:0000313|EMBL:AEB06812.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AEB06812.1};; TaxID=700015 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Coriobacterium.;" source="Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 /; PW2).;"
DNA-directed DNA polymerase n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2N7J6_CORGP
71_012_scaffold_276_3
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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3328..4194
DNA (867bp) protein (289aa)
ImpB/mucB/samB family protein n=2 Tax=Anaerostipes RepID=E5VTW6_9FIRM
ImpB/mucB/samB family protein {ECO:0000313|EMBL:EFV22748.1}; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
UMUC domain-containing protein DNA-repair protein; K03502 DNA polymerase V
71_012_scaffold_276_4
Dialister sp. CAG:357, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4187..4510
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Dialister sp. CAG:357 RepID=R7CRG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80048.1}; TaxID=1262869 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:357.;"
hypothetical protein
71_012_scaffold_276_5
unknown

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4898..5143
DNA (246bp) protein (82aa)

This feature has no annotations

71_012_scaffold_276_6
unknown

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5213..5890
DNA (678bp) protein (226aa)

This feature has no annotations

71_012_scaffold_276_7
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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6037..7077
DNA (1041bp) protein (347aa)
Hemin ABC transporter, permease protein n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KS02_9FIRM
Hemin ABC transporter, permease protein {ECO:0000313|EMBL:EFG24598.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
transporter permease; K02015 iron complex transport system permease protein
71_012_scaffold_276_8
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7077..8183
DNA (1107bp) protein (369aa)
Iron-chelate-transporting ATPase {ECO:0000313|EMBL:AJQ28731.1}; EC=3.6.3.34 {ECO:0000313|EMBL:AJQ28731.1};; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans JBW45.;"
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
ABC transporter related protein n=1 Tax=Pelosinus fermentans JBW45 RepID=I8TUB0_9FIRM
71_012_scaffold_276_9
unknown

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8608..8784
DNA (177bp) protein (59aa)

This feature has no annotations

71_012_scaffold_276_10
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8967..9158
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LC04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET61957.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
71_012_scaffold_276_11
unknown

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9257..9349
DNA (93bp) protein (31aa)

This feature has no annotations

71_012_scaffold_276_12
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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9346..11160
DNA (1815bp) protein (605aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
kdpA; high affinity K+-transporting ATPase subunit A (EC:3.6.3.12); K01546 K+-transporting ATPase ATPase A chain [EC:3.6.3.12]
Potassium-transporting ATPase A chain n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UQL5_9FIRM
71_012_scaffold_276_13
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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11176..13245
DNA (2070bp) protein (690aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
kdpB; high affinity K+-transporting ATPase subunit B (EC:3.6.3.12); K01547 K+-transporting ATPase ATPase B chain [EC:3.6.3.12]
Potassium-transporting ATPase B chain n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UTB4_9FIRM
71_012_scaffold_276_14
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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13260..13403
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UQF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERT61652.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
71_012_scaffold_276_15
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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13417..14049
DNA (633bp) protein (211aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
kdpC; high affinity K+-transporting ATPase subunit C (EC:3.6.3.12); K01548 K+-transporting ATPase ATPase C chain [EC:3.6.3.12]
Potassium-transporting ATPase C chain n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UR20_9FIRM
71_012_scaffold_276_16
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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14060..16753
DNA (2694bp) protein (898aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
Osmosensitive K+ channel histidine kinase (EC:2.7.13.3)
Osmosensitive K+ channel His kinase sensor domain protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UR60_9FIRM
71_012_scaffold_276_17
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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16746..17447
DNA (702bp) protein (234aa)
Response regulator receiver domain protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UQY8_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:ERT61735.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
71_012_scaffold_276_18
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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17517..18011
DNA (495bp) protein (165aa)
Transcriptional regulator TetR family n=1 Tax=Roseburia sp. CAG:309 RepID=R6YTL5_9FIRM
Transcriptional regulator TetR family {ECO:0000313|EMBL:CDD34744.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
71_012_scaffold_276_19
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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18345..18575
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UR74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERT61781.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
transposase dde domain
Displaying 19 items

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