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71_012_scaffold_326

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_326_1
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1..1113)
DNA (1113bp) protein (371aa)
Putrescine:ornithine antiporter n=1 Tax=Dialister invisus CAG:218 RepID=R5SJF2_9FIRM
Putrescine:ornithine antiporter {ECO:0000313|EMBL:CCZ53233.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
Putrescine/proton symporter, putrescine/ornithine antiporter PotE; K03756 putrescine:ornithine antiporter
71_012_scaffold_326_2
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2002..2481
DNA (480bp) protein (160aa)
Transcription elongation factor GreA n=2 Tax=Dialister RepID=C9LN70_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
transcription elongation factor GreA
71_012_scaffold_326_3
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2507..4408
DNA (1902bp) protein (634aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Lysine--tRNA ligase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LN69_9FIRM
71_012_scaffold_326_4
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4468..4953
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HNH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31233.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Acetyltransferase (GNAT) family.
71_012_scaffold_326_5
Selenomonas flueggei, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(4996..5625)
DNA (630bp) protein (210aa)
lecithin retinol acyltransferase (EC:2.3.1.135)
Uncharacterized protein n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V597_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ47976.1}; TaxID=638302 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas flueggei ATCC 43531.;"
71_012_scaffold_326_6
unknown

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5633..6082
DNA (450bp) protein (150aa)

This feature has no annotations

71_012_scaffold_326_7
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(6508..7779)
DNA (1272bp) protein (424aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
M18 family aminopeptidase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LN60_9FIRM
Aspartyl aminopeptidase
71_012_scaffold_326_8
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7781..8164)
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Dialister RepID=C9LN59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ53823.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
hypothetical protein
71_012_scaffold_326_9
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8322..9062
DNA (741bp) protein (247aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
tRNA pseudouridine synthase A n=1 Tax=Dialister invisus CAG:218 RepID=R5SSM7_9FIRM
71_012_scaffold_326_10
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9192..10001
DNA (810bp) protein (270aa)
Cof-like hydrolase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LN57_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EEW96993.1}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
cof family hydrolase; K07024
71_012_scaffold_326_11
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10005..10913
DNA (909bp) protein (303aa)
UPF0042 nucleotide-binding protein GCWU000321_00976 n=2 Tax=Dialister RepID=C9LN56_9FIRM
Nucleotide-binding protein GCWU000321_00976 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
hypothetical protein; K06958 UPF0042 nucleotide-binding protein
71_012_scaffold_326_12
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10910..12256
DNA (1347bp) protein (449aa)
Putative gluconeogenesis factor n=1 Tax=Dialister invisus DSM 15470 RepID=C9LN55_9FIRM
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
hypothetical protein
71_012_scaffold_326_13
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12256..13191
DNA (936bp) protein (312aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Dialister invisus CAG:218 RepID=R5SIJ8_9FIRM
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
sporulation transcription regulator whiA; K09762 hypothetical protein
71_012_scaffold_326_14
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13192..14238
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Dialister invisus CAG:218 RepID=R5T3U6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ53626.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
71_012_scaffold_326_15
Dialister sp. CAG:486, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14248..14475
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Dialister sp. CAG:486 RepID=R6BB57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA50537.1}; TaxID=1262870 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:486.;"
hypothetical protein
71_012_scaffold_326_trna_1
unknown

Not on your lists

14599..14671
DNA (73bp)
transferRNA Thr
71_012_scaffold_326_trna_2
unknown

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14678..14759
DNA (82bp)
transferRNA Tyr
71_012_scaffold_326_trna_3
unknown

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14768..14840
DNA (73bp)
transferRNA Met
71_012_scaffold_326_trna_4
unknown

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14872..14944
DNA (73bp)
transferRNA Thr
71_012_scaffold_326_trna_5
unknown

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14949..15022
DNA (74bp)
transferRNA Met
71_012_scaffold_326_16
Oribacterium sinus, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15214..15309
DNA (96bp) protein (32aa)
Elongation factor Tu n=2 Tax=Oribacterium RepID=F5T7M9_9FIRM
tuf; elongation factor Tu; K02358 elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=585501 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sinus F0268.;"
Displaying 21 items

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