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71_012_scaffold_314

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_314_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..571)
DNA (570bp) protein (190aa)
fhs; formate-tetrahydrofolate ligase (EC:6.3.4.3); K01938 formate--tetrahydrofolate ligase [EC:6.3.4.3]
Putative formate--tetrahydrofolate ligase {ECO:0000313|EMBL:EFM40650.1}; EC=6.3.4.3 {ECO:0000313|EMBL:EFM40650.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Formate-tetrahydrofolate ligase n=2 Tax=Bifidobacterium dentium RepID=D2Q7W6_BIFDB
71_012_scaffold_314_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(662..2260)
DNA (1599bp) protein (533aa)
dipeptidase; K08659 dipeptidase [EC:3.4.-.-]
Dipeptidase n=2 Tax=Bifidobacterium dentium RepID=D2Q7W5_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26238.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
71_012_scaffold_314_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2385..2942)
DNA (558bp) protein (186aa)
Raf-like protein n=2 Tax=Bifidobacterium dentium RepID=B1S7E0_9BIFI
hypothetical protein; K06910
Raf-like protein {ECO:0000313|EMBL:ETO96000.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_314_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3211..4863)
DNA (1653bp) protein (551aa)
PTS system, enzyme I (EC:2.7.3.9); K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9]
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Phosphoenolpyruvate-protein phosphotransferase n=2 Tax=Bifidobacterium dentium RepID=D2Q7W3_BIFDB
71_012_scaffold_314_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5148..5408
DNA (261bp) protein (87aa)
hpr; HPr family phosphocarrier (EC:2.7.3.9); K11189 phosphocarrier protein
HPr family phosphocarrier n=4 Tax=Bifidobacterium dentium RepID=D2Q7W2_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26235.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
71_012_scaffold_314_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5552..6565
DNA (1014bp) protein (338aa)
LacI-type transcriptional regulator n=4 Tax=Bifidobacterium dentium RepID=D2Q7W1_BIFDB
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
LacI-type transcriptional regulator {ECO:0000313|EMBL:ADB08932.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
71_012_scaffold_314_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6615..7766)
DNA (1152bp) protein (384aa)
DNA polymerase III subunit delta prime subunit (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
DNA polymerase III subunit delta prime subunit {ECO:0000313|EMBL:ADB08931.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ADB08931.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
DNA polymerase III, delta' subunit n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S7E4_9BIFI
71_012_scaffold_314_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7763..8521)
DNA (759bp) protein (253aa)
tmk; thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9]
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Thymidylate kinase n=2 Tax=Bifidobacterium dentium RepID=D2Q7V9_BIFDB
71_012_scaffold_314_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8563..11577)
DNA (3015bp) protein (1005aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
topA; DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2]
DNA topoisomerase 1 n=2 Tax=Bifidobacterium dentium RepID=D2Q7V8_BIFDB
71_012_scaffold_314_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11678..12676)
DNA (999bp) protein (333aa)
Pre-pilin peptidase or phosphoesterase n=2 Tax=Bifidobacterium dentium RepID=D2Q7V7_BIFDB
PAP2 family protein {ECO:0000313|EMBL:ETO95951.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
pre-pilin peptidase or phosphoesterase
71_012_scaffold_314_11
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12992..14170
DNA (1179bp) protein (393aa)
UDP-galactopyranose mutase {ECO:0000313|EMBL:ETO95972.1}; EC=5.4.99.9 {ECO:0000313|EMBL:ETO95972.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
UDP-glactopyranose mutase (EC:5.4.99.9); K01854 UDP-galactopyranose mutase [EC:5.4.99.9]
UDP-glactopyranose mutase n=2 Tax=Bifidobacterium dentium RepID=D2Q7V6_BIFDB
71_012_scaffold_314_12
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14553..15695)
DNA (1143bp) protein (381aa)
Inositol 1-phosphate synthase {ECO:0000313|EMBL:ETO95932.1}; EC=5.5.1.- {ECO:0000313|EMBL:ETO95932.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
myo-inositol-l-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4]
Inositol 1-phosphate synthase n=2 Tax=Bifidobacterium dentium RepID=E0Q9N7_9BIFI
71_012_scaffold_314_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15926..16243
DNA (318bp) protein (106aa)
penicillin-binding protein (EC:2.4.1.129)
Penicillin-binding protein {ECO:0000313|EMBL:ADB08925.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ADB08925.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Transglycosylase n=2 Tax=Bifidobacterium dentium RepID=E0Q9N8_9BIFI
Displaying 13 items

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