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71_012_scaffold_165

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_165_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1092)
DNA (1092bp) protein (364aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Transcription termination factor Rho n=3 Tax=Bifidobacterium dentium RepID=E0QAL0_9BIFI
rho; transcription termination factor Rho; K03628 transcription termination factor Rho
71_012_scaffold_165_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1353..2942)
DNA (1590bp) protein (530aa)
Flavin containing amine oxidoreductase n=4 Tax=Bifidobacterium dentium RepID=D2Q6L6_BIFDB
flavin containing amine oxidoreductase
NAD(P)-binding Rossmann-like domain protein {ECO:0000313|EMBL:ETO96500.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_165_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3146..5041)
DNA (1896bp) protein (632aa)
Histidine acid phosphatase n=2 Tax=Bifidobacterium dentium RepID=E0QAK8_9BIFI
Histidine phosphatase superfamily (Branch 2) {ECO:0000313|EMBL:ETO96507.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
71_012_scaffold_165_4
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5203..5517)
DNA (315bp) protein (105aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=E1NAF4_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETY72359.1}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
71_012_scaffold_165_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5517..6590)
DNA (1074bp) protein (358aa)
acetyltransferase (EC:2.3.1.57)
Acetyltransferase, GNAT family n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0QAK6_9BIFI
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFM40354.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
71_012_scaffold_165_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6834..8330)
DNA (1497bp) protein (499aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
gatB; aspartyl/glutamyl-tRNA(Gln) amidotransferase subunit B (EC:6.1.1.18); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=2 Tax=Bifidobacterium dentium RepID=E0QAK5_9BIFI
71_012_scaffold_165_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8356..9891)
DNA (1536bp) protein (512aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
gatA; aspartyl/glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Glutamyl-tRNA(Gln) amidotransferase subunit A n=2 Tax=Bifidobacterium dentium RepID=E0QAK4_9BIFI
71_012_scaffold_165_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9893..10189)
DNA (297bp) protein (99aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=3 Tax=Bifidobacterium dentium RepID=B1SAA8_9BIFI
71_012_scaffold_165_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10740..11615
DNA (876bp) protein (292aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0QAK2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40350.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
71_012_scaffold_165_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11657..12619)
DNA (963bp) protein (321aa)
tRNA/rRNA methyltransferase (EC:2.1.1.34)
RNA methyltransferase, TrmH family n=2 Tax=Bifidobacterium dentium RepID=E0QAK1_9BIFI
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:ETO96527.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_165_11
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12708..13370)
DNA (663bp) protein (221aa)
pyrE; orotate phosphoribosyltransferase PyrE (EC:2.4.2.10)
Orotate phosphoribosyltransferase PyrE n=2 Tax=Bifidobacterium dentium RepID=D2Q6M5_BIFDB
Orotate phosphoribosyltransferase family protein {ECO:0000313|EMBL:ETO96517.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_165_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13396..14739)
DNA (1344bp) protein (448aa)
RmuC domain protein n=2 Tax=Bifidobacterium dentium RepID=E0QAJ9_9BIFI
RmuC domain protein {ECO:0000313|EMBL:EFM40347.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
DNA recombination protein rmuC-like protein; K09760 DNA recombination protein RmuC
71_012_scaffold_165_13
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14897..15895
DNA (999bp) protein (333aa)
ActP copper transport ATPase n=2 Tax=Bifidobacterium dentium RepID=D2Q6M7_BIFDB
Putative membrane protein {ECO:0000313|EMBL:ETO96504.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
actP; actP copper transport ATPase
71_012_scaffold_165_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15982..18735)
DNA (2754bp) protein (918aa)
clpB; ATP-dependent chaperone ClpB (EC:3.6.4.3); K03695 ATP-dependent Clp protease ATP-binding subunit ClpB
ATP-dependent chaperone protein ClpB n=2 Tax=Bifidobacterium dentium RepID=E0QAJ7_9BIFI
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_165_15
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18889..19710)
DNA (822bp) protein (274aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC:5.3.3.10)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=2 Tax=Bifidobacterium dentium RepID=D2Q6M9_BIFDB
FAH family protein {ECO:0000313|EMBL:ETO96499.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_165_16
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19731..20255)
DNA (525bp) protein (175aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0QAJ5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO96516.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
71_012_scaffold_165_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20715..22319)
DNA (1605bp) protein (535aa)
LPXTG-motif cell wall anchor domain protein n=2 Tax=Bifidobacterium dentium RepID=E0QAJ3_9BIFI
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EFM40341.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
fimbrial subunit
71_012_scaffold_165_18
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22468..24048)
DNA (1581bp) protein (527aa)
von Willebrand factor type A domain protein n=2 Tax=Bifidobacterium dentium RepID=E0QAJ2_9BIFI
Cna protein B-type domain protein {ECO:0000313|EMBL:ETO96501.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
71_012_scaffold_165_19
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24053..25372)
DNA (1320bp) protein (440aa)
von Willebrand factor type A domain protein n=2 Tax=Bifidobacterium dentium RepID=E0QAJ2_9BIFI
von Willebrand factor type A domain protein {ECO:0000313|EMBL:ETO96503.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
71_012_scaffold_165_20
unknown

Not on your lists

comp(25551..25682)
DNA (132bp) protein (44aa)

This feature has no annotations

71_012_scaffold_165_21
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25654..26688)
DNA (1035bp) protein (345aa)
sortase; K07284 sortase A [EC:3.4.22.70]
Sortase n=2 Tax=Bifidobacterium dentium RepID=D2Q6N3_BIFDB
Sortase {ECO:0000313|EMBL:ADB10574.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
71_012_scaffold_165_22
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26799..27785)
DNA (987bp) protein (329aa)
Pyridoxal phosphate enzyme, YggS family n=2 Tax=Bifidobacterium dentium RepID=E0QAJ0_9BIFI
Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:EFM40338.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein; K06997
71_012_scaffold_165_23
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27961..28368)
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0QAI9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO96518.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
71_012_scaffold_165_24
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28653..29678
DNA (1026bp) protein (342aa)
gltX; glutamyl-Q tRNA(Asp) synthetase GltX (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17]
Putative glutamyl-queuosine tRNA(Asp) synthetase n=2 Tax=Bifidobacterium dentium RepID=E0QAI8_9BIFI
tRNA ligase class I, catalytic domain protein {ECO:0000313|EMBL:ETO96508.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_165_25
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29693..30574)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0QAI7_9BIFI
PF11350 family protein {ECO:0000313|EMBL:ETO96526.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
71_012_scaffold_165_26
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30640..31371)
DNA (732bp) protein (244aa)
Glycerol uptake facilitator-like protein in Mip family n=4 Tax=Bifidobacterium dentium RepID=D2Q6N8_BIFDB
glycerol uptake facilitator-like protein in Mip family; K02440 glycerol uptake facilitator protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27884.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
71_012_scaffold_165_27
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31958..33073
DNA (1116bp) protein (372aa)
Fibronectin binding protein I Cpa n=2 Tax=Bifidobacterium dentium RepID=D2Q6N9_BIFDB
cpa; fibronectin binding protein I Cpa
Fibronectin binding protein I Cpa {ECO:0000313|EMBL:ADB10580.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Displaying 27 items

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