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71_012_scaffold_178

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_178_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

49..639
DNA (591bp) protein (197aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9R1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO95925.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
71_012_scaffold_178_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(803..1789)
DNA (987bp) protein (329aa)
Uncharacterized protein n=3 Tax=Bifidobacterium dentium RepID=B1S7H5_9BIFI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ETO96037.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_178_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1828..2427)
DNA (600bp) protein (200aa)
TetR-type transcriptional regulator n=4 Tax=Bifidobacterium dentium RepID=D2Q7T5_BIFDB
TetR family transcriptional regulator
TetR-type transcriptional regulator {ECO:0000313|EMBL:ADB08906.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
71_012_scaffold_178_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2630..3508)
DNA (879bp) protein (293aa)
AraC-type transcriptional regulator n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q7T6_BIFDB
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ETO96052.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
AraC family transcriptional regulator
71_012_scaffold_178_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3651..5915)
DNA (2265bp) protein (755aa)
alpha-galactosidase (EC:3.2.1.22); K07407 alpha-galactosidase [EC:3.2.1.22]
Alpha-galactosidase n=2 Tax=Bifidobacterium dentium RepID=E0Q9Q7_9BIFI
Alpha-galactosidase {ECO:0000313|EMBL:ETO95924.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_178_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6172..8727
DNA (2556bp) protein (852aa)
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:ETO95985.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ETO95985.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
dnaX; DNA polymerase III subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
DNA polymerase III, subunit gamma and tau n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S7H0_9BIFI
71_012_scaffold_178_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8758..9360
DNA (603bp) protein (201aa)
Recombination protein RecR n=4 Tax=Bifidobacterium dentium RepID=D2Q7T9_BIFDB
recR; recombination protein RecR; K06187 recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
71_012_scaffold_178_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9543..10304
DNA (762bp) protein (254aa)
aspartokinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4]
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Aspartokinase n=4 Tax=Bifidobacterium dentium RepID=D2Q7U0_BIFDB
71_012_scaffold_178_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10349..10912
DNA (564bp) protein (188aa)
aspartokinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4]
Aspartokinase n=4 Tax=Bifidobacterium dentium RepID=D2Q7U1_BIFDB
ACT domain protein {ECO:0000313|EMBL:ETO95946.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_178_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11330..12424)
DNA (1095bp) protein (365aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ETO95979.1}; EC=1.2.1.11 {ECO:0000313|EMBL:ETO95979.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11); K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
Aspartate-semialdehyde dehydrogenase n=2 Tax=Bifidobacterium dentium RepID=E0Q9Q1_9BIFI
71_012_scaffold_178_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12728..13348
DNA (621bp) protein (207aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S7G3_9BIFI
hypothetical protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26215.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
71_012_scaffold_178_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13586..15166)
DNA (1581bp) protein (527aa)
Phosphohydrolase, calcineurin-like phosphoesterase n=4 Tax=Bifidobacterium dentium RepID=D2Q7U4_BIFDB
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EFM40673.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
phosphohydrolase
71_012_scaffold_178_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15291..17201
DNA (1911bp) protein (637aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
leuA; 2-isopropylmalate synthase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13]
2-isopropylmalate synthase n=4 Tax=Bifidobacterium dentium RepID=D2Q7U5_BIFDB
71_012_scaffold_178_14
unknown

Not on your lists

comp(17075..17350)
DNA (276bp) protein (92aa)

This feature has no annotations

71_012_scaffold_178_15
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17326..18942)
DNA (1617bp) protein (539aa)
beta-xylosidase (EC:3.2.1.99)
Glycosyl hydrolase, family 43 n=2 Tax=Bifidobacterium dentium RepID=E0Q9P6_9BIFI
Glycoside hydrolase, family 43 {ECO:0000313|EMBL:ETO96034.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_178_16
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18978..21092
DNA (2115bp) protein (705aa)
beta-xylosidase (EC:3.2.1.55)
Beta-xylosidase or endo-arabinofuranosidase n=2 Tax=Bifidobacterium dentium RepID=D2Q7U7_BIFDB
Glycoside hydrolase, family 43 {ECO:0000313|EMBL:ETO95984.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_178_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21233..22264
DNA (1032bp) protein (344aa)
Sugar-binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9P4_9BIFI
Sugar-binding domain protein {ECO:0000313|EMBL:EFM40669.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
LacI family transcriptional regulator
71_012_scaffold_178_18
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22445..23467
DNA (1023bp) protein (341aa)
exo-alpha-L-arabinofuranosidase (EC:3.2.1.55)
Glycosyl hydrolase, family 43 n=2 Tax=Bifidobacterium dentium RepID=E0Q9P3_9BIFI
Glycoside hydrolase, family 43 {ECO:0000313|EMBL:ETO96043.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_178_19
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23696..25291
DNA (1596bp) protein (532aa)
ABC transporter, solute-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9P2_9BIFI
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFM40667.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
sugar ABC transporter substrate-binding protein; K02027 multiple sugar transport system substrate-binding protein
71_012_scaffold_178_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25447..26424
DNA (978bp) protein (326aa)
ABC-type sugar transporter, permease component n=4 Tax=Bifidobacterium dentium RepID=D2Q7V1_BIFDB
ABC transporter, permease protein {ECO:0000313|EMBL:ETO96035.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
sugar ABC transporter permease; K02025 multiple sugar transport system permease protein
71_012_scaffold_178_21
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26452..27405
DNA (954bp) protein (318aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9P0_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:EFM40665.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein
71_012_scaffold_178_22
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27553..28629
DNA (1077bp) protein (359aa)
Endo-1,4-beta-xylanase n=2 Tax=Bifidobacterium dentium RepID=D2Q7V3_BIFDB
Uncharacterized protein {ECO:0000313|EMBL:ETO96032.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
endo-1,4-beta-xylanase
71_012_scaffold_178_23
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28751..30691)
DNA (1941bp) protein (647aa)
penicillin-binding protein (EC:2.4.1.129)
Transglycosylase n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S7F1_9BIFI
Transglycosylase {ECO:0000313|EMBL:ETO95995.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Displaying 23 items

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