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71_012_scaffold_199

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_199_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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73..1497
DNA (1425bp) protein (475aa)
DivIVA domain repeat protein n=2 Tax=Bifidobacterium dentium RepID=E0Q585_9BIFI
DivIVA domain repeat protein {ECO:0000313|EMBL:ETO95712.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
pyridoxine biosynthesis enzyme
71_012_scaffold_199_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1565..2743
DNA (1179bp) protein (393aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidob
ispC; IspC 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=2 Tax=Bifidobacterium dentium RepID=D2Q5J4_BIFDB
71_012_scaffold_199_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2810..3997
DNA (1188bp) protein (396aa)
ispG; IspG 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1]
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=2 Tax=Bifidobacterium dentium RepID=D2Q5J3_BIFDB
71_012_scaffold_199_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4024..5727
DNA (1704bp) protein (568aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q588_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42263.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hydrolase
71_012_scaffold_199_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5789..6517
DNA (729bp) protein (243aa)
DNA repair protein RecO n=4 Tax=Bifidobacterium dentium RepID=D2Q5J1_BIFDB
recO; DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O)
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
71_012_scaffold_199_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6523..7314
DNA (792bp) protein (264aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
uppS; undecaprenyl pyrophosphate synthetase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31]
Isoprenyl transferase n=3 Tax=Bifidobacterium dentium RepID=B1S6R2_9BIFI
71_012_scaffold_199_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7609..8514
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S6R3_9BIFI
PF13338 domain protein {ECO:0000313|EMBL:ETO95749.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
CTP synthase (UTP-ammonia lyase)
71_012_scaffold_199_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8660..9904)
DNA (1245bp) protein (415aa)
iunH1; IunH1 inosine-uridine preferring nucleoside hydrolase (EC:3.2.2.3)
IunH1 Inosine-uridine preferring nucleoside hydrolase n=2 Tax=Bifidobacterium dentium RepID=D2Q5I8_BIFDB
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:ETO95851.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_199_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10038..11114)
DNA (1077bp) protein (359aa)
Solute binding protein of ABC transporter system n=2 Tax=Bifidobacterium dentium RepID=D2Q5I7_BIFDB
NMT1/THI5-like protein {ECO:0000313|EMBL:ETO95680.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
ABC transporter substrate-binding protein; K15598 putative hydroxymethylpyrimidine transport system substrate-binding protein
71_012_scaffold_199_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11358..12131)
DNA (774bp) protein (258aa)
Uncharacterized protein n=3 Tax=Bifidobacterium dentium RepID=B1S724_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:ETO95806.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
ABC transporter permease; K15599 putative hydroxymethylpyrimidine transport system permease protein
71_012_scaffold_199_11
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12500..13825)
DNA (1326bp) protein (442aa)
Serine proteinase inhibitor n=2 Tax=Bifidobacterium dentium RepID=E0Q595_9BIFI
Serpin {ECO:0000313|EMBL:ETO95666.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Neuroserpin precursor; K13963 serpin B
71_012_scaffold_199_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14089..14751
DNA (663bp) protein (221aa)
Response regulator receiver domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q596_9BIFI
two-component response regulator
Response regulator receiver domain protein {ECO:0000313|EMBL:EFM42271.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
71_012_scaffold_199_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14751..16001
DNA (1251bp) protein (417aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q597_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42272.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
signal transduction histidine kinase-like protein
71_012_scaffold_199_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16038..17594)
DNA (1557bp) protein (519aa)
fosC; beta-fructofuranosidase (EC:2.4.1.243); K01193 beta-fructofuranosidase [EC:3.2.1.26]
Glycosyl hydrolase family 32 n=2 Tax=Bifidobacterium dentium RepID=E0Q598_9BIFI
Putative sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:ETO95695.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_199_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17724..18983)
DNA (1260bp) protein (420aa)
FosB Sucrose permease n=4 Tax=Bifidobacterium dentium RepID=D2Q5I1_BIFDB
fosB; sucrose permease; K02532 MFS transporter, OHS family, lactose permease
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27516.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
71_012_scaffold_199_16
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19330..20373)
DNA (1044bp) protein (348aa)
Sugar-binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5A0_9BIFI
Sugar-binding domain protein {ECO:0000313|EMBL:EFM42275.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
71_012_scaffold_199_17
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20449..20823)
DNA (375bp) protein (125aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S731_9BIFI
hypothetical protein
PF01910 family protein {ECO:0000313|EMBL:ETO95854.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_199_18
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20890..21732)
DNA (843bp) protein (281aa)
Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase {ECO:0000313|EMBL:ETO95823.1}; EC=2.7.1.49 {ECO:0000313|EMBL:ETO95823.1};; EC=2.7.4.7 {ECO:0000313|EMBL:ETO95823.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
thiD; ThiD phosphomethylpyrimidine kinase/Hydroxymethylpyrimidine kinase (EC:2.5.1.3); K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
ThiD Phosphomethylpyrimidine kinase/Hydroxymethylpyrimidine kinase n=2 Tax=Bifidobacterium dentium RepID=D2Q5H8_BIFDB
71_012_scaffold_199_19
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21820..22221)
DNA (402bp) protein (134aa)
thiC; thiamine biosynthesis protein ThiC (EC:2.5.1.3); K03147 thiamine biosynthesis protein ThiC
Phosphomethylpyrimidine synthase {ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|SAAS:SAAS00007809};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Thiamine biosynthesis protein ThiC n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q5H7_BIFDB
71_012_scaffold_199_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22179..24386)
DNA (2208bp) protein (736aa)
Phosphomethylpyrimidine synthase {ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|SAAS:SAAS00007809};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
thiC; thiamine biosynthesis protein ThiC (EC:2.5.1.3); K03147 thiamine biosynthesis protein ThiC
Thiamine biosynthesis family protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S733_9BIFI
71_012_scaffold_199_21
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24558..25466)
DNA (909bp) protein (303aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
thiM; ThiM Hydroxyethylthiazole kinase (EC:2.7.1.50); K00878 hydroxyethylthiazole kinase [EC:2.7.1.50]
Hydroxyethylthiazole kinase n=2 Tax=Bifidobacterium dentium RepID=D2Q5H6_BIFDB
71_012_scaffold_199_22
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25563..25688
DNA (126bp) protein (42aa)
aldo/keto reductase family (EC:1.1.1.64)
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EFM42281.1}; EC=1.1.1.218 {ECO:0000313|EMBL:EFM42281.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Oxidoreductase, aldo/keto reductase family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5A6_9BIFI
71_012_scaffold_199_23
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


25753..26517
DNA (765bp) protein (255aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
glycine--tRNA ligase (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q5A7_9BIFI
Displaying 23 items

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