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71_012_scaffold_215

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_215_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..199
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9H5_9BIFI
Putative membrane protein {ECO:0000313|EMBL:ETO94989.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
71_012_scaffold_215_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

281..1036
DNA (756bp) protein (252aa)
AP endonuclease, family 2 n=2 Tax=Bifidobacterium dentium RepID=E0Q9H4_9BIFI
sugar isomerase/epimerase
Xylose isomerase-like TIM barrel domain protein {ECO:0000313|EMBL:ETO95005.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_215_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1094..2065
DNA (972bp) protein (324aa)
sugar kinase (EC:2.7.1.4); K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
Sugar kinase n=2 Tax=Bifidobacterium dentium RepID=D2Q6I9_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26006.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
71_012_scaffold_215_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2127..2747
DNA (621bp) protein (207aa)
sugar decarboxylase or lyase/synthase (EC:4.1.1.85); K08093 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
Sugar decarboxylase or lyase/synthase n=2 Tax=Bifidobacterium dentium RepID=D2Q6J0_BIFDB
Orotidine 5'-phosphate decarboxylase/HUMPS domain protein {ECO:0000313|EMBL:ETO95013.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_215_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2744..3295
DNA (552bp) protein (184aa)
6-phospho 3-hexuloisomerase {ECO:0000313|EMBL:EFM40894.1}; EC=5.3.-.- {ECO:0000313|EMBL:EFM40894.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
sugar isomerase or sugar amino transferase (EC:2.7.1.2); K08094 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
6-phospho 3-hexuloisomerase n=2 Tax=Bifidobacterium dentium RepID=E0Q9H1_9BIFI
71_012_scaffold_215_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3594..4037
DNA (444bp) protein (148aa)
Large-conductance mechanosensitive channel n=4 Tax=Bifidobacterium dentium RepID=D2Q6J2_BIFDB
large-conductance mechanosensitive channel; K03282 large conductance mechanosensitive channel
Large conductance mechanosensitive channel protein {ECO:0000313|EMBL:EFM40893.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
71_012_scaffold_215_trna_3
unknown

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comp(4233..4305)
DNA (73bp)
transferRNA Ala
71_012_scaffold_215_trna_2
unknown

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comp(4307..4379)
DNA (73bp)
transferRNA Ala
71_012_scaffold_215_trna_1
unknown

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comp(4422..4495)
DNA (74bp)
transferRNA Ile
71_012_scaffold_215_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4647..5372
DNA (726bp) protein (242aa)
Predicted metal-dependent hydrolase n=2 Tax=Bifidobacterium dentium RepID=D2Q6J3_BIFDB
metal-dependent hydrolase; K07043
Predicted metal-dependent hydrolase {ECO:0000313|EMBL:ADB08715.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
71_012_scaffold_215_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5481..5960)
DNA (480bp) protein (160aa)
Ferritin-like protein n=2 Tax=Bifidobacterium dentium RepID=B1S8K4_9BIFI
hypothetical protein; K04047 starvation-inducible DNA-binding protein
Fine tangled pili major subunit family protein {ECO:0000313|EMBL:ETO94978.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_215_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6071..7372)
DNA (1302bp) protein (434aa)
Hemolysin-like protein containing CBS domains n=4 Tax=Bifidobacterium dentium RepID=D2Q6J5_BIFDB
Membrane protein, PF01595 family {ECO:0000313|EMBL:ETO94964.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hemolysin-like protein; K03699 putative hemolysin
71_012_scaffold_215_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7410..8108)
DNA (699bp) protein (233aa)
carbonic anhydrase (EC:4.2.1.1); K01673 carbonic anhydrase [EC:4.2.1.1]
Carbonate dehydratase {ECO:0000313|EMBL:ETO94972.1}; EC=4.2.1.1 {ECO:0000313|EMBL:ETO94972.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Carbonic anhydrase n=2 Tax=Bifidobacterium dentium RepID=D2Q6J6_BIFDB
71_012_scaffold_215_11
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8179..8904)
DNA (726bp) protein (242aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S8E7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO94992.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
71_012_scaffold_215_12
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9021..11777)
DNA (2757bp) protein (919aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|SAAS:SAAS00018769}; EC=4.1.1.31 {ECO:0000256|SAAS:SAAS00018769};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
phosphoenolpyruvate carboxylase (EC:4.1.1.31); K01595 phosphoenolpyruvate carboxylase [EC:4.1.1.31]
Phosphoenolpyruvate carboxylase n=2 Tax=Bifidobacterium dentium RepID=D2Q6J8_BIFDB
71_012_scaffold_215_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11964..13817
DNA (1854bp) protein (618aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q9G3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40886.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
71_012_scaffold_215_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13937..15565
DNA (1629bp) protein (543aa)
Predicted sodium/proline symporter n=2 Tax=Bifidobacterium dentium RepID=D2Q6K0_BIFDB
Putative sodium/proline symporter {ECO:0000313|EMBL:ETO94975.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
sodium/proline symporter; K11928 sodium/proline symporter
71_012_scaffold_215_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15743..16843)
DNA (1101bp) protein (367aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2]
Tryptophanyl-tRNA synthetase n=2 Tax=Bifidobacterium dentium RepID=D2Q6K1_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26018.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
71_012_scaffold_215_16
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16972..17346
DNA (375bp) protein (125aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S8E2_9BIFI
PF11273 family protein {ECO:0000313|EMBL:ETO94998.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
71_012_scaffold_215_17
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17441..17878)
DNA (438bp) protein (146aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9F9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO94962.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
71_012_scaffold_215_18
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18188..20632
DNA (2445bp) protein (815aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
glycogen phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1]
Phosphorylase n=2 Tax=Bifidobacterium dentium RepID=D2Q6Y0_BIFDB
71_012_scaffold_215_19
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21055..21276)
DNA (222bp) protein (74aa)
Uncharacterized protein n=3 Tax=Bifidobacterium dentium RepID=B1S8D9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40880.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
71_012_scaffold_215_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21465..22247
DNA (783bp) protein (261aa)
Peptidase, S54 family {ECO:0000313|EMBL:ETO94971.1}; EC=3.4.21.- {ECO:0000313|EMBL:ETO94971.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
rhomboid family protein (EC:3.4.21.105)
Peptidase, S54 family n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q9F6_9BIFI
71_012_scaffold_215_21
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22699..24066
DNA (1368bp) protein (456aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9F5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO95018.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
N6-adenine-specific methylase
71_012_scaffold_215_22
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24234..24488)
DNA (255bp) protein (85aa)
Cell division protein CrgA n=3 Tax=Bifidobacterium dentium RepID=B1S8D6_9BIFI
Cell division protein CrgA {ECO:0000256|HAMAP-Rule:MF_00631}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
Displaying 25 items

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