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71_012_scaffold_274

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_274_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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370..1134
DNA (765bp) protein (255aa)
SIR2 family protein (EC:2.4.2.31); K12410 NAD-dependent deacetylase [EC:3.5.1.-]
SIR2 family protein n=2 Tax=Bifidobacterium dentium RepID=D2Q7L2_BIFDB
Transcriptional regulator, Sir2 family {ECO:0000313|EMBL:ETO97574.1}; Flags: Fragment;; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_274_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1463..2770)
DNA (1308bp) protein (436aa)
tdcB; TdcB Threonine dehydratase (EC:4.3.1.19); K01754 threonine dehydratase [EC:4.3.1.19]
TdcB Threonine dehydratase n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q7L3_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28081.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
71_012_scaffold_274_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2897..4717)
DNA (1821bp) protein (607aa)
Oligo-1,6-glucosidase 1 {ECO:0000313|EMBL:ETO97556.1}; EC=3.2.1.10 {ECO:0000313|EMBL:ETO97556.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Oligo-1,6-glucosidase (EC:3.2.1.54); K01182 oligo-1,6-glucosidase [EC:3.2.1.10]
Alpha amylase, catalytic domain protein n=2 Tax=Bifidobacterium dentium RepID=E0QA36_9BIFI
71_012_scaffold_274_4
unknown

Not on your lists

comp(4896..5036)
DNA (141bp) protein (47aa)

This feature has no annotations

71_012_scaffold_274_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5099..5974)
DNA (876bp) protein (292aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium dentium RepID=E0QA30_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:ETO97564.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
raffinose transporter permease; K10119 multiple sugar transport system permease protein
71_012_scaffold_274_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5995..6909)
DNA (915bp) protein (305aa)
Raffinose transport system permease protein n=2 Tax=Bifidobacterium dentium RepID=D2Q7L8_BIFDB
raffinose transporter permease; K10118 multiple sugar transport system permease protein
ABC transporter, permease protein {ECO:0000313|EMBL:ETO97570.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_274_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6924..8216)
DNA (1293bp) protein (431aa)
Raffinose-binding protein n=4 Tax=Bifidobacterium dentium RepID=D2Q7L9_BIFDB
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ETO97573.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
raffinose-binding protein; K10117 multiple sugar transport system substrate-binding protein
71_012_scaffold_274_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8399..9601
DNA (1203bp) protein (401aa)
transcriptional repressor, ROK family (EC:2.7.1.4)
Transcriptional repressor, ROK family n=4 Tax=Bifidobacterium dentium RepID=D2Q7M0_BIFDB
ROK family protein {ECO:0000313|EMBL:ETO97560.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_274_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10050..12344)
DNA (2295bp) protein (765aa)
aga; alpha-galactosidase (EC:3.2.1.22); K07407 alpha-galactosidase [EC:3.2.1.22]
Alpha-galactosidase n=2 Tax=Bifidobacterium dentium RepID=E0QA26_9BIFI
Alpha-galactosidase {ECO:0000313|EMBL:ETO97554.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_274_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12502..12957)
DNA (456bp) protein (152aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
mesJ; tRNA-specific adenosine deaminase (EC:3.5.4.3)
MesJ tRNA-specific adenosine deaminase n=4 Tax=Bifidobacterium dentium RepID=D2Q7M2_BIFDB
71_012_scaffold_274_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13039..15111
DNA (2073bp) protein (691aa)
Na+/H+ antiporter n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S9J3_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28091.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
nhaP; NhaP Na+/H+ antiporter nhaP; K03316 monovalent cation:H+ antiporter, CPA1 family
71_012_scaffold_274_12
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15399..16157
DNA (759bp) protein (253aa)
Phospholipase/carboxylesterase n=4 Tax=Bifidobacterium dentium RepID=D2Q7M4_BIFDB
Serine hydrolase {ECO:0000313|EMBL:ETO97567.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
phospholipase/carboxylesterase; K06999 phospholipase/carboxylesterase
71_012_scaffold_274_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16268..16849
DNA (582bp) protein (194aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13]
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
Deoxycytidine triphosphate deaminase n=4 Tax=Bifidobacterium dentium RepID=D2Q7M5_BIFDB
71_012_scaffold_274_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17003..18937)
DNA (1935bp) protein (645aa)
pacL2; PacL2 Calcium-transporting ATPase (EC:3.6.3.8)
Putative calcium-translocating P-type ATPase, PMCA-type n=2 Tax=Bifidobacterium dentium RepID=E0QA20_9BIFI
Putative potassium/sodium efflux P-type ATPase, fungal-type {ECO:0000313|EMBL:ETO97555.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Displaying 14 items

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