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71_012_scaffold_301

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_301_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..770
DNA (768bp) protein (256aa)
alr; alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1]
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Alanine racemase n=2 Tax=Bifidobacterium dentium RepID=D2Q955_BIFDB
71_012_scaffold_301_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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869..2122
DNA (1254bp) protein (418aa)
deoxyguanosinetriphosphate triphosphohydrolase-like protein; K01129 dGTPase [EC:3.1.5.1]
Putative dGTPase n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S537_9BIFI
Putative dGTPase {ECO:0000313|EMBL:ETO98263.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_301_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2298..4370
DNA (2073bp) protein (691aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
dnaG; dnaG DNA primase; K02316 DNA primase [EC:2.7.7.-]
DNA primase n=3 Tax=Bifidobacterium dentium RepID=D2Q957_BIFDB
71_012_scaffold_301_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4743..5939
DNA (1197bp) protein (399aa)
Citrate transporter n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S535_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26645.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
transport protein
71_012_scaffold_301_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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6070..6315
DNA (246bp) protein (82aa)
Uncharacterized protein {ECO:0000313|EMBL:ETO98346.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_301_trna_1
unknown

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7107..7180
DNA (74bp)
transferRNA Arg
71_012_scaffold_301_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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7426..8391
DNA (966bp) protein (322aa)
Integral membrane protein n=2 Tax=Bifidobacterium dentium RepID=D2Q960_BIFDB
PF04657 family protein {ECO:0000313|EMBL:ETO98077.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
integral membrane protein; K09936 hypothetical protein
71_012_scaffold_301_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8936..10969
DNA (2034bp) protein (678aa)
Tetracycline resistance protein n=2 Tax=Bifidobacterium dentium RepID=D2Q962_BIFDB
GTP-binding domain protein {ECO:0000313|EMBL:ETO98096.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
tetracycline resistance protein
71_012_scaffold_301_8
unknown

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11085..11189
DNA (105bp) protein (35aa)

This feature has no annotations

71_012_scaffold_301_trna_4
unknown

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comp(11099..11171)
DNA (73bp)
transferRNA Gly
71_012_scaffold_301_trna_3
unknown

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comp(11205..11277)
DNA (73bp)
transferRNA Val
71_012_scaffold_301_trna_2
unknown

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comp(11322..11393)
DNA (72bp)
transferRNA Val
71_012_scaffold_301_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11469..12347)
DNA (879bp) protein (293aa)
Acyltransferase n=2 Tax=Bifidobacterium dentium RepID=D2Q963_BIFDB
Acetyltransferase (GNAT) domain protein {ECO:0000313|EMBL:ETO98149.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
acyltransferase
71_012_scaffold_301_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12614..13270
DNA (657bp) protein (219aa)
GlnP2 Glutamine transport system permease protein glnP n=4 Tax=Bifidobacterium dentium RepID=D2Q964_BIFDB
glnP2; glutamine transporter permease glnP; K02029 polar amino acid transport system permease protein
ABC transporter, permease protein {ECO:0000313|EMBL:ETO98234.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_301_11
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13257..13931
DNA (675bp) protein (225aa)
ABC transporter, permease protein n=3 Tax=Bifidobacterium dentium RepID=B1S4T3_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:ETO98339.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
amino acids ABC transporter permease; K02029 polar amino acid transport system permease protein
71_012_scaffold_301_12
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13924..14742
DNA (819bp) protein (273aa)
glnQ; glutamine transport ATP-binding protein glnQ (EC:3.6.3.20); K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21]
ABC transporter, ATP-binding protein n=3 Tax=Bifidobacterium dentium RepID=B1S4T2_9BIFI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETO98061.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_301_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14779..15684
DNA (906bp) protein (302aa)
glnH; glutamine-binding protein glnH (EC:4.2.1.91); K02030 polar amino acid transport system substrate-binding protein
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S4T1_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26654.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
71_012_scaffold_301_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15953..16963
DNA (1011bp) protein (337aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
2-dehydropantoate 2-reductase (EC:1.1.1.169); K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169]
2-dehydropantoate 2-reductase n=2 Tax=Bifidobacterium dentium RepID=D2Q968_BIFDB
71_012_scaffold_301_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17022..17153
DNA (132bp) protein (44aa)
Lipoprotein n=2 Tax=Bifidobacterium dentium RepID=D2Q969_BIFDB
NLPA lipoprotein; K02073 D-methionine transport system substrate-binding protein
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Displaying 19 items

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