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71_012_scaffold_336

Search features with annotation key words

Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_336_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42..1490)
DNA (1449bp) protein (483aa)
MFS transporter, SP family n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S9B0_9BIFI
MFS transporter, SP family {ECO:0000313|EMBL:ETO96206.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
glucose/fructose transport protein
71_012_scaffold_336_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1691..2575
DNA (885bp) protein (295aa)
Transcriptional regulator, AraC family n=2 Tax=Bifidobacterium dentium RepID=D2QAU7_BIFDB
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADB09933.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
71_012_scaffold_336_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2652..3422)
DNA (771bp) protein (257aa)
res; type III restriction protein res subunit; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3]
Uncharacterized protein n=3 Tax=Bifidobacterium dentium RepID=B1S9A8_9BIFI
Type I site-specific deoxyribonuclease {ECO:0000313|EMBL:ETO96256.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_336_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3696..4181)
DNA (486bp) protein (162aa)
Sortase n=4 Tax=Bifidobacterium dentium RepID=D2QAU9_BIFDB
sortase
Sortase {ECO:0000313|EMBL:ADB09935.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
71_012_scaffold_336_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4846..5007)
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5Y7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42061.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
71_012_scaffold_336_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5195..5692)
DNA (498bp) protein (166aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S9A0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO96265.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
71_012_scaffold_336_7
unknown

Not on your lists

comp(5766..5918)
DNA (153bp) protein (51aa)

This feature has no annotations

71_012_scaffold_336_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6161..6700)
DNA (540bp) protein (180aa)
Lysine decarboxylase n=2 Tax=Bifidobacterium dentium RepID=D2QAV2_BIFDB
TIGR00730 family protein {ECO:0000313|EMBL:ETO96329.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
lysine decarboxylase; K06966
71_012_scaffold_336_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6779..7603)
DNA (825bp) protein (275aa)
Cobalt transport protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5Y3_9BIFI
Cobalt transport protein {ECO:0000313|EMBL:ETO96168.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
ABC transporter permease; K02008 cobalt/nickel transport system permease protein
71_012_scaffold_336_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7600..9093)
DNA (1494bp) protein (498aa)
ABC transporter ATP-binding protein (EC:3.6.3.17); K02006 cobalt/nickel transport system ATP-binding protein
Cobalt ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q5Y2_9BIFI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETO96317.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_336_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9198..9809)
DNA (612bp) protein (204aa)
Permease protein of ABC transporter system n=4 Tax=Bifidobacterium dentium RepID=D2QAV5_BIFDB
ABC transporter permease
Permease protein of ABC transporter system {ECO:0000313|EMBL:ADB09941.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
71_012_scaffold_336_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9978..11102)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5Y0_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27261.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
mrp; mrp ATP-binding Mrp-like protein; K03593 ATP-binding protein involved in chromosome partitioning
71_012_scaffold_336_13
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11188..13881)
DNA (2694bp) protein (898aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
NAD-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2]
DNA ligase n=2 Tax=Bifidobacterium dentium RepID=D2QAV7_BIFDB
71_012_scaffold_336_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13897..14535)
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5X8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO96323.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
Displaying 14 items

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