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71_012_scaffold_346

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_346_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..229)
DNA (228bp) protein (76aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.8); K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1NCI2_9BIFI
71_012_scaffold_346_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(273..1151)
DNA (879bp) protein (293aa)
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5F5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO95815.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_346_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1186..2988)
DNA (1803bp) protein (601aa)
FtsI Peptidoglycan synthetase FtsI, penicillin-binding protein {ECO:0000313|EMBL:ADB10142.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ADB10142.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
ftsI; peptidoglycan synthetase FtsI, penicillin-binding protein (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129]
FtsI Peptidoglycan synthetase FtsI, penicillin-binding protein n=2 Tax=Bifidobacterium dentium RepID=D2Q5C7_BIFDB
71_012_scaffold_346_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2985..3440)
DNA (456bp) protein (152aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S7I6_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETO95799.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_012_scaffold_346_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3442..4473)
DNA (1032bp) protein (344aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
mraW; S-adenosyl-methyltransferase; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
Ribosomal RNA small subunit methyltransferase H n=4 Tax=Bifidobacterium dentium RepID=D2Q5C9_BIFDB
71_012_scaffold_346_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4473..4988)
DNA (516bp) protein (172aa)
MraZ Cell division protein mraZ n=4 Tax=Bifidobacterium dentium RepID=D2Q5D0_BIFDB
mraZ; cell division protein MraZ; K03925 MraZ protein
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
71_012_scaffold_346_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5245..7524
DNA (2280bp) protein (760aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
ATP-dependent DNA helicase n=2 Tax=Bifidobacterium dentium RepID=D2Q5D1_BIFDB
ATP-dependent DNA helicase
71_012_scaffold_346_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7535..8734
DNA (1200bp) protein (400aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:ETO95688.1}; EC=1.1.1.290 {ECO:0000313|EMBL:ETO95688.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
serA; D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
Phosphoglycerate dehydrogenase n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S7I2_9BIFI
71_012_scaffold_346_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8823..9296)
DNA (474bp) protein (158aa)
Transcriptional repressor NrdR n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q5E8_9BIFI
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR
71_012_scaffold_346_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9316..9714)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S775_9BIFI
LysM domain protein {ECO:0000313|EMBL:ETO95853.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
71_012_scaffold_346_11
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9865..10578
DNA (714bp) protein (238aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
lexA; LexA repressor; K01356 repressor LexA [EC:3.4.21.88]
LexA repressor n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1NCH2_9BIFI
71_012_scaffold_346_12
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10628..11569)
DNA (942bp) protein (314aa)
Cation diffusion facilitator family transporter n=2 Tax=Bifidobacterium dentium RepID=E0Q5E5_9BIFI
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ETO95671.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
czcD; cobalt-zinc-cadmium resistance protein czcD; K03295 cation efflux system protein, CDF family
71_012_scaffold_346_13
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11839..12801)
DNA (963bp) protein (321aa)
ldh2; L-lactate dehydrogenase (EC:1.1.1.27); K00024 malate dehydrogenase [EC:1.1.1.37]
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L-lactate dehydrogenase n=4 Tax=Bifidobacterium dentium RepID=D2Q5D7_BIFDB
71_012_scaffold_346_14
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13000..13797)
DNA (798bp) protein (266aa)
GTPase HflX n=2 Tax=Bifidobacterium dentium RepID=E0Q5E3_9BIFI
hflX; hflX GTP-binding protein hflX; K03665 GTP-binding protein HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
Displaying 14 items

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