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71_012_scaffold_196_21

Organism: 71_012_Bifidobacterium_sp._MSTE12_59_9

partial RP 38 / 55 MC: 4 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 3
Location: comp(23182..24015)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 277.0
  • Bit_score: 559
  • Evalue 3.60e-156
rplQ; 50S ribosomal protein L17 (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 277.0
  • Bit_score: 558
  • Evalue 1.10e-156
tRNA pseudouridine synthase A n=2 Tax=Bifidobacterium dentium RepID=D2Q8J8_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 277.0
  • Bit_score: 558
  • Evalue 3.40e-156

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Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 834
GTGCAGGGGGAGATCGAGCGCATACTGCACACCGTGTTGCGCGTGCCCGTCGATGATGCGGGGGAACCTCTCCGTCTGACCGTTGCGGGACGTACCGATACCGGTGTGCACGCCTCGCATCAGGTATGCCATCTGGACATCTCTGAAACCATACTCGCCCGTTGCGTTGGGCACATGAATGTGCCGCCAGTGGTCGCGTTGACGCGCCGGTTGCAGCGTATGCTGCCGAACGACATCACGATTCATGGGATCAACGAGGCTCCCCAAGGCTTTGATGCCCGTTTTTCCGCGCTGGAACGCACCTACGTATACCGCATTGCCGATCGGAGCAGCGAAATTGATCCGAGGATGCGCGGTTTCGTCCTGCACGTCGACGACGATCTGGATCTGGAAACCATGAACCAGGCCGCGGCCATGACCATCGGCCTGCATGACTTCGGTTCGTTCGCCACGCCAAACCCCGGCGGCACCACCATACGTGAGGTCAAAACCGCCTACTGGAGGCGCATACCGCAACGTCCACTCATTGACGGCGAGATGACGATGGGGGAGCGTTACCGTACGCCGTCAATGGAATCCGGTCTCGCCTGCTTCACCATCGTGGCCGACGCATTCGCCCGCAACATGGTGCGATCGCTGGTCAACGGCTGCGTACAGGTCGGCATCGGCAAACGATCCCTCGATTGGTTTGCGGACAAGATGGCCACACCGCTGCGCGAAGGCTCGACGGGACCGATCGCACCGCAGGGGCTGACATTGGAGCATATCGAATATCCCGATGACGATCAGTTGGCGATTCGTGCCGAAACGATTCGCGCGAAACGTACCTTATGA
PROTEIN sequence
Length: 278
VQGEIERILHTVLRVPVDDAGEPLRLTVAGRTDTGVHASHQVCHLDISETILARCVGHMNVPPVVALTRRLQRMLPNDITIHGINEAPQGFDARFSALERTYVYRIADRSSEIDPRMRGFVLHVDDDLDLETMNQAAAMTIGLHDFGSFATPNPGGTTIREVKTAYWRRIPQRPLIDGEMTMGERYRTPSMESGLACFTIVADAFARNMVRSLVNGCVQVGIGKRSLDWFADKMATPLREGSTGPIAPQGLTLEHIEYPDDDQLAIRAETIRAKRTL*