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71_012_scaffold_196_23

Organism: 71_012_Bifidobacterium_sp._MSTE12_59_9

partial RP 38 / 55 MC: 4 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 3
Location: comp(24760..25755)

Top 3 Functional Annotations

Value Algorithm Source
polA; polA DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 331.0
  • Bit_score: 650
  • Evalue 3.20e-184
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 331.0
  • Bit_score: 650
  • Evalue 1.40e-183
DNA-directed RNA polymerase subunit alpha n=4 Tax=Bifidobacterium dentium RepID=D2Q8J6_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 331.0
  • Bit_score: 650
  • Evalue 1.00e-183

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Taxonomy

Bifidobacterium dentium → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 996
GTGCTTATCGCACAGCGTCCGACACTTACCGAGGAATCTCTCAACCCTCAGCGTTCCCGCTTCACCATCGAGCCTCTCGAGCCTGGTTTCGGCTACACGCTTGGCAACTCGCTGCGCCGTACCCTCCTGAGCTCCATTCCTGGAGCGGCTGTGACTTCGGTGCGTATCTCCGGCGTCCCGCATGAGTTCACCACTCTGCCGGGTGTTGAAGAGGACGTTACCGAGATCCTGCTGAACATCAAGGGCATCGTGCTCACCAGCGAATACGATGAGCCGGTTGTCATGTATCTGCGCAAGAGCGGCAAGGGCGAAGCCACCGCGGGTGATATCACCCCGCCGGCCGGCGTCACCATCGCCAACCCGGATATGCATATCGCGTCCCTCGCCGATGATGGCGAACTCGAGATCGAGTTCACCGTCGAGCGTGGCCGCGGTTACGTTCCCGCTCAGATGAACAAGCAGGACAACGCCGAGATCGGCCGTATCCCGGTTGATTCGATTTACTCCCCGGTGCTCAAGGTGAGCTATCGCGTGGAAGCCACCCGCGTTGAACAGCGCACTGACTTCGACAAGCTCATCCTGGACGTGGAGACCAAGCCGGCAATCTCCCCGCGTGATGCAGTCGCATCCGCTGGTTCCACCTTGGTGGAGCTCTTCGGCCTGTGCCGTGAGCTCAACACCCAGGCTGAAGGCGTCGAGGTCGGCCCTGCCCCGGTGGCAGAGGAGACCAACCCGGAGATGGCCGTTCCGATCGAGGACCTCAACCTCACTCAGCGTAGCTACAACTGCCTGAAGCGCGAGGGCATCCACACGATCGGTGAGCTGGTCGCCCACACCGAGCAGGATCTGCTCGACATCCGCAATTTCGGCATGAAATCCATCGACGAAGTCAAGGAAAAGTTGCAGGCTCTTGGCCTGGCTCTCAAAGCTTCGCCGCTCGGTTTCGATGCCAACAACCTCGAAGGCGGCACCTTCTTCTCGCCGGAAGACGAGTGA
PROTEIN sequence
Length: 332
VLIAQRPTLTEESLNPQRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRISGVPHEFTTLPGVEEDVTEILLNIKGIVLTSEYDEPVVMYLRKSGKGEATAGDITPPAGVTIANPDMHIASLADDGELEIEFTVERGRGYVPAQMNKQDNAEIGRIPVDSIYSPVLKVSYRVEATRVEQRTDFDKLILDVETKPAISPRDAVASAGSTLVELFGLCRELNTQAEGVEVGPAPVAEETNPEMAVPIEDLNLTQRSYNCLKREGIHTIGELVAHTEQDLLDIRNFGMKSIDEVKEKLQALGLALKASPLGFDANNLEGGTFFSPEDE*