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71_012_scaffold_646

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_646_1
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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1..504
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B6F9A1
TM2 domain protein {ECO:0000313|EMBL:EEH66039.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
TM2 domain protein
71_012_scaffold_646_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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795..1490
DNA (696bp) protein (232aa)
translation initiation factor IF-3 n=1 Tax=Varibaculum cambriense RepID=UPI0003B42125
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
translation initiation factor IF-3
71_012_scaffold_646_3
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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1553..1753
DNA (201bp) protein (67aa)
50S ribosomal protein L35 n=1 Tax=Varibaculum cambriense RepID=UPI0003B64F1F
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
50S ribosomal protein L35; K02916 large subunit ribosomal protein L35
71_012_scaffold_646_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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1775..2155
DNA (381bp) protein (127aa)
50S ribosomal protein L20 n=1 Tax=Varibaculum cambriense RepID=UPI0003B7B201
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20
71_012_scaffold_646_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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2201..3010
DNA (810bp) protein (270aa)
RNA methyltransferase n=1 Tax=Varibaculum cambriense RepID=UPI0003B66DD0
Putative RNA methyltransferase {ECO:0000313|EMBL:ETI83581.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
TrmH family rRNA methyltransferase; K03437 RNA methyltransferase, TrmH family
71_012_scaffold_646_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3035..3436)
DNA (402bp) protein (134aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B4BB88
Transcriptional regulator, Fur family {ECO:0000313|EMBL:ETI83586.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
FUR family transcriptional regulator
71_012_scaffold_646_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3467..4420)
DNA (954bp) protein (318aa)
DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta [EC:2.7.7.7]
DNA polymerase III subunit delta n=1 Tax=Varibaculum cambriense RepID=UPI0003B75DC0
DNA polymerase III, delta subunit {ECO:0000313|EMBL:ETI83587.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
71_012_scaffold_646_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(4417..6045)
DNA (1629bp) protein (543aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B355EF
Uncharacterized protein {ECO:0000313|EMBL:ETI83588.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
71_012_scaffold_646_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6053..6190)
DNA (138bp) protein (46aa)
competence protein ComEA n=1 Tax=Varibaculum cambriense RepID=UPI0003B345DC
Uncharacterized protein {ECO:0000313|EMBL:ETI83589.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
competence protein ComEA-like protein with helix-hairpin-helix repeat region; K02237 competence protein ComEA
Displaying 9 items

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