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71_012_scaffold_369

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_369_1
unknown

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3..71
DNA (69bp) protein (23aa)

This feature has no annotations

71_012_scaffold_369_2
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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199..441
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BMX1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ41541.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
glutaredoxin
71_012_scaffold_369_3
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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524..1687
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Atopobium minutum 10063974 RepID=N2BIG2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ41542.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
hypothetical protein
71_012_scaffold_369_4
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1725..3359
DNA (1635bp) protein (545aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BSL3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ41543.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
hypothetical protein
71_012_scaffold_369_5
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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3380..4942
DNA (1563bp) protein (521aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BXC4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ41544.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
ATPase
71_012_scaffold_369_6
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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5028..6581
DNA (1554bp) protein (518aa)
dipeptidase A; K08659 dipeptidase [EC:3.4.-.-]
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BSU3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ41545.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
71_012_scaffold_369_7
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6596..7648
DNA (1053bp) protein (351aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BMX6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ41546.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
LdcA; hypothetical protein
71_012_scaffold_369_8
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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7670..8734
DNA (1065bp) protein (355aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=2 Tax=Atopobium RepID=N2BIG4_9ACTN
71_012_scaffold_369_9
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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8721..9143
DNA (423bp) protein (141aa)
preQ(0) biosynthesis protein QueD; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12]
Queuosine biosynthesis protein QueD n=2 Tax=Atopobium RepID=N2BSL7_9ACTN
Queuosine biosynthesis protein QueD {ECO:0000313|EMBL:EMZ41548.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
71_012_scaffold_369_10
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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9202..10245
DNA (1044bp) protein (348aa)
glucan 1,3-beta-glucosidase; K01210 glucan 1,3-beta-glucosidase [EC:3.2.1.58]
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BXC8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ41549.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
71_012_scaffold_369_11
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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10257..11186
DNA (930bp) protein (310aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BSU4_9ACTN
71_012_scaffold_369_12
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


11234..12841
DNA (1608bp) protein (536aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10]
Methionine--tRNA ligase n=2 Tax=Atopobium RepID=N2BMY0_9ACTN
71_012_scaffold_369_13
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12845..13006
DNA (162bp) protein (54aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-
dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Atopobium sp. BV3Ac4 RepID=U2UAE7_9ACTN
Displaying 13 items

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