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71_012_scaffold_885

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_012_scaffold_885_1
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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2..169
DNA (168bp) protein (56aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source=
adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3]
Adenylate kinase n=2 Tax=Atopobium RepID=N2BM64_9ACTN
71_012_scaffold_885_2
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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166..954
DNA (789bp) protein (263aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18]
Methionine aminopeptidase n=2 Tax=Atopobium RepID=N2BW84_9ACTN
71_012_scaffold_885_3
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1048..1266
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=2 Tax=Atopobium RepID=N2C0Y6_9ACTN
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
translation initiation factor IF-1; K02518 translation initiation factor IF-1
71_012_scaffold_885_4
Atopobium vaginae, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1403..1516
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=6 Tax=Atopobium RepID=C8W7X5_ATOPD
50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=866774 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium vaginae PB189-T1-4.;"
71_012_scaffold_885_5
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1532..1900
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=2 Tax=Atopobium RepID=N2BRI2_9ACTN
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
71_012_scaffold_885_6
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1913..2314
DNA (402bp) protein (134aa)
30S ribosomal protein S11 n=2 Tax=Atopobium RepID=N2BM78_9ACTN
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
30S ribosomal protein S11P; K02948 small subunit ribosomal protein S11
71_012_scaffold_885_7
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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2333..2926
DNA (594bp) protein (198aa)
30S ribosomal protein S4 n=2 Tax=Atopobium RepID=N2BW91_9ACTN
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4
71_012_scaffold_885_8
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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2950..3891
DNA (942bp) protein (314aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
DNA-directed RNA polymerase subunit alpha n=2 Tax=Atopobium RepID=N2C0Z2_9ACTN
71_012_scaffold_885_9
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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3927..4286
DNA (360bp) protein (120aa)
50S ribosomal protein L17 n=2 Tax=Atopobium RepID=N2BWA7_9ACTN
50S ribosomal protein L17 {ECO:0000256|RuleBase:RU000661}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
LSU ribosomal protein L17P; K02879 large subunit ribosomal protein L17
Displaying 9 items

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