ggKbase home page

71_013_scaffold_376

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_013_scaffold_376_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(177..1058)
DNA (882bp) protein (294aa)
UPI0003D5D25D related cluster n=1 Tax=unknown RepID=UPI0003D5D25D
Uncharacterized protein {ECO:0000313|EMBL:ETI82038.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
tnp3521; IS3521 transposase
71_013_scaffold_376_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1173..1373)
DNA (201bp) protein (67aa)
UPI0003D64869 related cluster n=1 Tax=unknown RepID=UPI0003D64869
Transposase IS6110 {ECO:0000313|EMBL:ETI82039.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
71_013_scaffold_376_3
unknown

Not on your lists

1548..1976
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B5B7C8
71_013_scaffold_376_4
Actinomyces massiliensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2144..2527
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B6F1FA
Uncharacterized protein {ECO:0000313|EMBL:EJF37006.1}; TaxID=1125718 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces massiliensis F0489.;"
71_013_scaffold_376_5
unknown

Not on your lists

2524..2913
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B58FBB
71_013_scaffold_376_6
Actinomyces sp. ICM47, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2788..3219)
DNA (432bp) protein (144aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=936548 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM47.;"
ATP-dependent DNA helicase II; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
UvrD/REP helicase N-terminal domain protein n=1 Tax=Actinomyces sp. ICM39 RepID=J2YRY0_9ACTO
71_013_scaffold_376_7
Mobiluncus curtisii, Mobiluncus, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3454..4083)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B2E70C
Uncharacterized protein {ECO:0000313|EMBL:EFU82454.1}; TaxID=887899 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Mobiluncus.;" source="Mobiluncus curtisii subsp. holmesii ATCC 35242.;"
hypothetical protein
71_013_scaffold_376_8
Mobiluncus curtisii, Mobiluncus, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4080..4925)
DNA (846bp) protein (282aa)
ABC transporter n=1 Tax=Varibaculum cambriense RepID=UPI0003B46C32
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFU82453.1}; TaxID=887899 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Mobiluncus.;" source="Mobiluncus curtisii subsp. holmesii ATCC 35242.;"
hypothetical protein
71_013_scaffold_376_9
Mobiluncus curtisii, Mobiluncus, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4912..5295)
DNA (384bp) protein (128aa)
Transcriptional regulator, GntR family n=1 Tax=Mobiluncus curtisii subsp. holmesii ATCC 35242 RepID=E6M3B6_9ACTO
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFU82452.1}; TaxID=887899 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Mobiluncus.;" source="Mobiluncus curtisii subsp. holmesii ATCC 35242.;"
GntR family transcriptional regulator; K07979 GntR family transcriptional regulator
71_013_scaffold_376_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5527..5853
DNA (327bp) protein (109aa)
PadR family transcriptional regulator n=1 Tax=Varibaculum cambriense RepID=UPI0003B6DD94
Uncharacterized protein {ECO:0000313|EMBL:ETI83323.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein; K10947 PadR family transcriptional regulator, regulatory protein PadR
71_013_scaffold_376_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5853..6548
DNA (696bp) protein (232aa)
UPI0003D64FC9 related cluster n=1 Tax=unknown RepID=UPI0003D64FC9
Uncharacterized protein {ECO:0000313|EMBL:ETI83324.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
71_013_scaffold_376_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6545..6871
DNA (327bp) protein (109aa)
UPI0003D5C2A2 related cluster n=1 Tax=unknown RepID=UPI0003D5C2A2
Uncharacterized protein {ECO:0000313|EMBL:ETI83325.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
71_013_scaffold_376_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6874..7707
DNA (834bp) protein (278aa)
ABC transporter ATP-binding protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B5C787
Uncharacterized protein {ECO:0000313|EMBL:ETI83326.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ccmA; phosphate import ATP-binding protein
71_013_scaffold_376_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7704..8483
DNA (780bp) protein (260aa)
ABC transporter permease n=1 Tax=Varibaculum cambriense RepID=UPI0003B69D0B
Uncharacterized protein {ECO:0000313|EMBL:ETI83327.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter inner membrane protein
71_013_scaffold_376_15
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9044..9250
DNA (207bp) protein (69aa)
Uncharacterized protein n=4 Tax=Propionibacterium RepID=M9VCL6_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERS64892.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KPL1852.;"
71_013_scaffold_376_16
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9275..10462
DNA (1188bp) protein (396aa)
N-6 DNA methylase n=1 Tax=Propionibacterium avidum 44067 RepID=M9VCC6_9ACTO
N-6 DNA methylase
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:EMZ41968.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
Displaying 16 items

View Taxonomy