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71_013_scaffold_163

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_013_scaffold_163_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(96..1271)
DNA (1176bp) protein (392aa)
Inner membrane protein ydcO n=2 Tax=Escherichia coli RepID=L4AZD3_ECOLX
benzoate transporter; K05782 benzoate membrane transport protein
Benzoate transporter {ECO:0000313|EMBL:EII44096.1}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.;"
71_013_scaffold_163_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1363..1899
DNA (537bp) protein (179aa)
Uncharacterized HTH-type transcriptional regulator YdcN n=300 Tax=Enterobacteriaceae RepID=YDCN_ECOLI
ydcN; DNA-binding transcriptional regulator
Helix-turn-helix family protein {ECO:0000313|EMBL:KEO12703.1}; TaxID=1444179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C3.;"
71_013_scaffold_163_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1972..3933
DNA (1962bp) protein (654aa)
ydcP; peptidase; K08303 putative protease [EC:3.4.-.-]
Uncharacterized protein n=4 Tax=Escherichia coli RepID=N3MT31_ECOLX
Protease {ECO:0000313|EMBL:KDV65214.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
71_013_scaffold_163_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4025..4195)
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Escherichia coli RepID=UPI0002B8D52C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESD65301.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
71_013_scaffold_163_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4477..4653
DNA (177bp) protein (59aa)
Probable mRNA interferase HicA n=150 Tax=Escherichia RepID=HICA_ECO57
hypothetical protein
mRNA interferase {ECO:0000313|EMBL:KIG78962.1}; mRNA interferase toxin of the HicAB toxin-antitoxin system {ECO:0000313|EMBL:AKF55321.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
71_013_scaffold_163_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4678..5115
DNA (438bp) protein (146aa)
DNA-binding protein n=90 Tax=Enterobacteriaceae RepID=A7ZLN1_ECO24
DNA-binding protein
Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:EJE61188.1}; TaxID=1165944 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:H8 str. CVM9634.;"
71_013_scaffold_163_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5194..6600
DNA (1407bp) protein (469aa)
Bacterial regulatory protein, GntR family n=1 Tax=Escherichia coli 9.0111 RepID=I2WF43_ECOLX
Bacterial regulatory protein, GntR family {ECO:0000313|EMBL:EII23271.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
ydcR; bifunctional DNA-binding transcriptional regulator/aminotransferase
71_013_scaffold_163_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6845..7990
DNA (1146bp) protein (382aa)
Putative ABC transporter periplasmic-binding protein YdcS n=187 Tax=Enterobacteriaceae RepID=YDCS_ECOLI
ydcS; putative spermidine/putrescine transporter subunit; K02055 putative spermidine/putrescine transport system substrate-binding protein
Spermidine/putrescine transporter subunit {ECO:0000313|EMBL:EQY25049.1}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3212-1.;"
71_013_scaffold_163_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8008..9021
DNA (1014bp) protein (338aa)
Spermidine/putrescine transporter subunit n=1 Tax=Escherichia coli KTE210 RepID=L3EF22_ECOLX
ydcT; spermidine/putrescine transporter subunit
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ESD65306.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
71_013_scaffold_163_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9022..9963
DNA (942bp) protein (314aa)
ABC transporter, permease protein n=141 Tax=Escherichia RepID=A8A000_ECOHS
ydcU; putative spermidine/putrescine transporter subunit; K02054 putative spermidine/putrescine transport system permease protein
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KDV65220.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
71_013_scaffold_163_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9953..10747
DNA (795bp) protein (265aa)
ABC transporter, permease protein n=105 Tax=Escherichia RepID=D5D2H4_ECOKI
ydcV_3; Inner membrane ABC transporter permease protein ydcV
Inner membrane ABC transporter permease ydcV {ECO:0000313|EMBL:EQX89816.1}; TaxID=1281210 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3190-1.;"
71_013_scaffold_163_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10769..12193
DNA (1425bp) protein (475aa)
ydcW; Gamma-aminobutyraldehyde dehydrogenase; K00137 aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
Gamma-aminobutyraldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01275}; EC=1.2.1.19 {ECO:0000256|HAMAP-Rule:MF_01275};; 1-pyrroline dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01275}; 4-aminobutanal dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01275}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
Gamma-aminobutyraldehyde dehydrogenase n=38 Tax=Escherichia coli RepID=C3TAP5_ECOLX
71_013_scaffold_163_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12580..12753
DNA (174bp) protein (58aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=V6EIK9_ECOLX
ydcX; hypothetical protein
Membrane protein {ECO:0000313|EMBL:EZE29364.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
71_013_scaffold_163_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12839..13072
DNA (234bp) protein (78aa)
Uncharacterized protein YdcY n=1340 Tax=cellular organisms RepID=YDCY_ECO57
hypothetical protein
PF10735 family protein {ECO:0000313|EMBL:EIG83921.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
71_013_scaffold_163_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13073..13522)
DNA (450bp) protein (150aa)
Inner membrane protein YdcZ n=513 Tax=Enterobacteriaceae RepID=YDCZ_ECOLI
hypothetical protein; K09936 hypothetical protein
Inner membrane protein ydcZ {ECO:0000313|EMBL:ELE01064.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
71_013_scaffold_163_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13519..14037)
DNA (519bp) protein (173aa)
yncA; putative acyltransferase; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183]
Phosphinothricin N-acetyltransferase n=1 Tax=Shigella dysenteriae RepID=UPI0003257361
Acetyltransferase family protein {ECO:0000313|EMBL:EMW21479.1}; TaxID=1116125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2845650.;"
71_013_scaffold_163_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14215..15252
DNA (1038bp) protein (346aa)
Predicted oxidoreductase, Zn-dependent and NAD(P)-binding n=209 Tax=Enterobacteriaceae RepID=C8U8C6_ECO10
yncB; oxidoreductase, Zn-dependent and NAD(P)-binding; K07119
NADP-dependent oxidoreductase {ECO:0000313|EMBL:EZA36275.1}; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
71_013_scaffold_163_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15450..16115
DNA (666bp) protein (222aa)
Uncharacterized protein n=151 Tax=Escherichia RepID=B6IAJ6_ECOSE
colanic acid/biofilm transcriptional regulator
HTH-type transcriptional regulator mcbR {ECO:0000313|EMBL:EOW07780.1}; TaxID=1182701 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE102.;"
71_013_scaffold_163_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16151..18253)
DNA (2103bp) protein (701aa)
TonB dependent receptor family protein n=4 Tax=Escherichia coli RepID=M9I238_ECOLX
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ESA66801.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
outer membrane receptor for iron transport; K02014 iron complex outermembrane recepter protein
71_013_scaffold_163_20
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18495..19556
DNA (1062bp) protein (354aa)
PQQ enzyme repeat family protein n=7 Tax=Enterobacteriaceae RepID=F3V5I6_SHIDY
PQQ enzyme repeat family protein {ECO:0000313|EMBL:EGI99709.1}; TaxID=766142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae 155-74.;"
hypothetical protein
71_013_scaffold_163_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19671..21170)
DNA (1500bp) protein (500aa)
L-asparagine permease n=487 Tax=Enterobacteriaceae RepID=ANSP_ECOLI
ansP; L-asparagine transporter; K11738 L-asparagine permease
L-asparagine permease {ECO:0000313|EMBL:EYV10960.1}; TaxID=1446596 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:NM str. 2010C-3526.;"
71_013_scaffold_163_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22108..22638
DNA (531bp) protein (177aa)
Uncharacterized protein n=6 Tax=Escherichia coli RepID=L3EDA5_ECOLX
Type IV secretion protein Rhs {ECO:0000313|EMBL:KIH01625.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
hypothetical protein
71_013_scaffold_163_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22635..22997
DNA (363bp) protein (121aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=L3EDZ0_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESA66795.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
hypothetical protein
71_013_scaffold_163_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23219..25216
DNA (1998bp) protein (666aa)
Type VI secretion system Vgr family protein n=8 Tax=Escherichia coli RepID=L3EF35_ECOLX
Type VI secretion protein Vgr {ECO:0000313|EMBL:KIH01626.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
hypothetical protein
71_013_scaffold_163_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25263..25496
DNA (234bp) protein (78aa)
Uncharacterized protein n=7 Tax=Enterobacteriaceae RepID=L3EDD8_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EMX51176.1}; Flags: Fragment;; TaxID=1116139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.2.;"
hypothetical protein
Displaying 25 items

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