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71_013_scaffold_204

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_013_scaffold_204_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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215..907
DNA (693bp) protein (231aa)
Transcriptional regulator, GntR family n=342 Tax=Enterobacteriaceae RepID=A7ZTW6_ECO24
yieP; transcriptional regulator
FCD domain protein {ECO:0000313|EMBL:EIG92124.1}; TaxID=869670 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0246.;"
71_013_scaffold_204_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

930..2357
DNA (1428bp) protein (476aa)
Predicted multidrug or homocysteine efflux system protein HsrA n=74 Tax=Enterobacteriaceae RepID=C8UJE5_ECO1A
hsrA; multidrug or homocysteine efflux system
Putative transport protein hsrA {ECO:0000313|EMBL:EMX46128.1}; TaxID=1116139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.2.;"
71_013_scaffold_204_3
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2323..3315)
DNA (993bp) protein (331aa)
Ribose operon repressor n=544 Tax=Enterobacteriaceae RepID=RBSR_ECO57
rbsR; DNA-binding transcriptional repressor RbsR; K02529 LacI family transcriptional regulator
RbsR protein {ECO:0000313|EMBL:CEP59128.1}; TaxID=42897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 2a.;"
71_013_scaffold_204_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3319..4248)
DNA (930bp) protein (310aa)
rbsK; ribokinase; K00852 ribokinase [EC:2.7.1.15]
Ribokinase {ECO:0000313|EMBL:EFK52947.1}; EC=2.7.1.15 {ECO:0000313|EMBL:EFK52947.1};; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
Ribokinase n=95 Tax=Enterobacteriaceae RepID=B5YY10_ECO5E
71_013_scaffold_204_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4374..5264)
DNA (891bp) protein (297aa)
D-ribose periplasmic binding protein n=1147 Tax=Enterobacteriaceae RepID=C3SL12_ECOLX
rbsB; D-ribose transporter subunit RbsB; K10439 ribose transport system substrate-binding protein
D-ribose-binding periplasmic protein {ECO:0000313|EMBL:EGI49061.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
71_013_scaffold_204_6
Shigella sonnei, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5289..6254)
DNA (966bp) protein (322aa)
Ribose transport system permease protein RbsC n=1343 Tax=Enterobacteriaceae RepID=RBSC_ECO57
rbsC; ribose ABC transporter permease; K10440 ribose transport system permease protein
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:EJL11661.1}; TaxID=754077 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella sonnei str. Moseley.;"
71_013_scaffold_204_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6259..7764)
DNA (1506bp) protein (502aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
ATP-binding component of D-ribose high-affinity transport system n=47 Tax=Escherichia coli RepID=J7QIS5_ECOLX
D-ribose ABC transporter ATP-binding protein
71_013_scaffold_204_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7772..8191)
DNA (420bp) protein (140aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
D-ribose pyranase n=59 Tax=Enterobacteriaceae RepID=J7QXP1_ECOLX
D-ribose pyranase
71_013_scaffold_204_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8358..10226)
DNA (1869bp) protein (623aa)
Low affinity potassium transport system protein kup n=924 Tax=Enterobacteriaceae RepID=KUP_ECO24
Low affinity potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; Kup system potassium uptake protein {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1182673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE66.;"
kup; low affinity potassium transport system protein; K03549 KUP system potassium uptake protein
71_013_scaffold_204_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10449..11945
DNA (1497bp) protein (499aa)
regulatory ATPase variant A RavA; K03924 MoxR-like ATPase [EC:3.6.3.-]
ATPase RavA {ECO:0000256|HAMAP-Rule:MF_01625}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01625};; Regulatory ATPase variant A {ECO:0000256|HAMAP-Rule:MF_01625}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C2.;"
ATPase RavA n=256 Tax=Enterobacteriaceae RepID=RAVA_ECOBW
71_013_scaffold_204_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11939..13390
DNA (1452bp) protein (484aa)
Protein ViaA n=554 Tax=Enterobacteriaceae RepID=VIAA_ECO57
yieM; protoheme IX farnesyltransferase
Protein ViaA {ECO:0000256|HAMAP-Rule:MF_01626, ECO:0000256|SAAS:SAAS00012203}; VWA domain protein interacting with AAA ATPase {ECO:0000256|HAMAP-Rule:MF_01626}; TaxID=1169340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE21.;"
71_013_scaffold_204_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13395..14387)
DNA (993bp) protein (331aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
asnA; asparagine synthetase AsnA (EC:6.3.1.1); K01914 aspartate--ammonia ligase [EC:6.3.1.1]
Aspartate--ammonia ligase n=109 Tax=Escherichia coli RepID=D6I310_ECOLX
71_013_scaffold_204_13
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14539..14997
DNA (459bp) protein (153aa)
Regulatory protein AsnC n=1413 Tax=Enterobacteriaceae RepID=ASNC_ECO57
asnC; DNA-binding transcriptional dual regulator AsnC; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Regulatory protein AsnC {ECO:0000313|EMBL:EIQ24365.1}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 965-58.;"
71_013_scaffold_204_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15087..15530
DNA (444bp) protein (148aa)
MioC protein n=302 Tax=Enterobacteriaceae RepID=A7ZTV3_ECO24
mioC; FMN-binding protein MioC; K06205 MioC protein
Protein mioC {ECO:0000313|EMBL:EGW85912.1}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli STEC_DG131-3.;"
71_013_scaffold_204_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15909..17798
DNA (1890bp) protein (630aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=815 Tax=Enterobacteriaceae RepID=MNMG_ECO24
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=656444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA280.;"
mnmG; tRNA uridine 5-carboxymethylaminomethyl modification
71_013_scaffold_204_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17862..18485
DNA (624bp) protein (208aa)
gidB; methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
Ribosomal RNA small subunit methyltransferase G n=1222 Tax=Enterobacteriaceae RepID=RSMG_ECO27
71_013_scaffold_204_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19102..19482
DNA (381bp) protein (127aa)
ATP F0F1 synthase subunit I {ECO:0000313|EMBL:EZE09775.1}; EC=3.6.3.14 {ECO:0000313|EMBL:EZE09775.1};; TaxID=1446753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O69:H11 str. 08-4661.;"
UPI0003D5A811 related cluster n=1 Tax=unknown RepID=UPI0003D5A811
ATP synthase I chain; K02116 ATP synthase protein I
71_013_scaffold_204_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19491..20306
DNA (816bp) protein (272aa)
ATP synthase subunit a n=835 Tax=Enterobacteriaceae RepID=ATP6_ECO24
atpB; ATP synthase subunit A
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1268977 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113302.;"
71_013_scaffold_204_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20593..21063
DNA (471bp) protein (157aa)
atpF; ATP synthase F0, B subunit AtpF; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
ATP synthase subunit b n=1428 Tax=cellular organisms RepID=ATPF_ECO24
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=745156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1303.;"
71_013_scaffold_204_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21097..21501
DNA (405bp) protein (135aa)
F0F1 ATP synthase subunit delta (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14]
ATP synthase subunit delta n=1225 Tax=cellular organisms RepID=ATPD_ECO24
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1125634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 174750.;"
71_013_scaffold_204_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21633..23021
DNA (1389bp) protein (463aa)
atpA; ATP synthase subunit alpha (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14]
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1165949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11 str. CVM9942.;"
ATP synthase subunit alpha n=1424 Tax=Enterobacteriaceae RepID=ATPA_ECO24
71_013_scaffold_204_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23072..23686
DNA (615bp) protein (205aa)
atpG; F1 sector of membrane-bound ATP synthase subunit gamma AtpG; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14]
ATP synthase gamma chain n=1 Tax=Escherichia coli DEC9E RepID=H5DAB8_ECOLX
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
Displaying 22 items

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