ggKbase home page

71_013_scaffold_699

Search features with annotation key words

Displaying 20 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_013_scaffold_699_1
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(153..731)
DNA (579bp) protein (193aa)
BRO family, N-terminal domain protein n=11 Tax=Enterobacteriaceae RepID=D7XH48_ECOLX
Prophage antirepressor {ECO:0000313|EMBL:EFW55505.1}; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
putative antirepressor protein encoded by prophage CP-933N
71_013_scaffold_699_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(788..1045)
DNA (258bp) protein (86aa)
Prophage CP4-57 regulatory protein (AlpA) n=12 Tax=Enterobacteriaceae RepID=B2U4Z1_SHIB3
prophage CP4-57 regulatory protein (AlpA)
Transcriptional regulator, AlpA family {ECO:0000313|EMBL:EFU32707.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
71_013_scaffold_699_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1047..2288)
DNA (1242bp) protein (414aa)
Site-specific recombinase, phage integrase family n=11 Tax=Enterobacteriaceae RepID=D7XH50_ECOLX
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFJ89331.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
putative integrase of prophage
71_013_scaffold_699_4
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2437..3318)
DNA (882bp) protein (294aa)
Portal protein B n=2 Tax=Escherichia coli RepID=T5XXX8_ECOLX
Phage portal protein, lambda family {ECO:0000313|EMBL:EFW55502.1}; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
B; portal protein b (gpb)
71_013_scaffold_699_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3315..3521)
DNA (207bp) protein (69aa)
Lambda prophage-derived head-to-tail joining protein W n=703 Tax=root RepID=VHTJ_ECOL6
Putative Phage head-to-tail joining protein
GpW {ECO:0000313|EMBL:EGI47277.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
71_013_scaffold_699_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3518..5443)
DNA (1926bp) protein (642aa)
Terminase large subunit n=36 Tax=Escherichia RepID=G2CX18_ECOLX
putative packaging protein
Large terminase {ECO:0000313|EMBL:ESP10580.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
71_013_scaffold_699_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5518..5772)
DNA (255bp) protein (85aa)
Terminase small subunit n=1 Tax=Escherichia coli 2845650 RepID=M8Z8I2_ECOLX
Terminase small subunit {ECO:0000313|EMBL:CDL25639.1}; TaxID=1432555 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC7.;"
nu1; DNA packaging protein
71_013_scaffold_699_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6161..6394
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=N4J1P7_ECOLX
ynfO; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAR11825.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
71_013_scaffold_699_9
Escherichia sp. KTE11, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6451..6861
DNA (411bp) protein (137aa)
Uncharacterized protein n=111 Tax=Enterobacteriaceae RepID=B7LBB3_ECO55
phage protein
Phage protein {ECO:0000313|EMBL:ELC20357.1}; TaxID=1169331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE11.;"
71_013_scaffold_699_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7213..7356)
DNA (144bp) protein (48aa)
Predicted protein n=91 Tax=Enterobacteriaceae RepID=D7JKH8_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMV23640.1}; TaxID=1116002 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli C-34666.;"
71_013_scaffold_699_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7353..7820)
DNA (468bp) protein (156aa)
Rz; Endopeptidase from phage origin (EC:3.1.3.16); K14744 putative Rz endopeptidase from lambdoid prophage DLP12 [EC:3.4.-.-]
Endopeptidase from phage origin (Lysis protein Rz) n=90 Tax=Escherichia RepID=B7N9C1_ECOLU
Bacteriophage lysis family protein {ECO:0000313|EMBL:KDW34282.1}; TaxID=1444150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S3_C2.;"
71_013_scaffold_699_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7817..8314)
DNA (498bp) protein (166aa)
ybcS; DLP12 prophage; lysozyme (EC:3.2.1.17)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1444223 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-267-03_S4_C1.;"
Lysozyme n=90 Tax=Escherichia coli RepID=A1AAX3_ECOK1
71_013_scaffold_699_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8314..8529)
DNA (216bp) protein (72aa)
Lysis protein S n=35 Tax=Escherichia coli RepID=B3I4J7_ECOLX
holin protein
Lysis S family protein {ECO:0000313|EMBL:EHX30592.1}; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12A.;"
71_013_scaffold_699_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9118..10200
DNA (1083bp) protein (361aa)
Outer membrane porin protein C n=78 Tax=Enterobacteriaceae RepID=H9UQ34_ECOLX
nmpC; Outer membrane porin protein C
Outer membrane porin protein ompD {ECO:0000313|EMBL:EHV63478.1}; TaxID=868161 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC6B.;"
71_013_scaffold_699_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10389..10772)
DNA (384bp) protein (128aa)
Phage antitermination Q type 1 family n=159 Tax=Escherichia coli RepID=A7ZJG9_ECO24
ybcQ; antitermination protein
Phage antitermination Q family protein {ECO:0000313|EMBL:EMX11899.1}; TaxID=1125634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 174750.;"
71_013_scaffold_699_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11282..11623)
DNA (342bp) protein (114aa)
Uncharacterized protein n=230 Tax=Escherichia RepID=B7MJF3_ECO45
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEO04092.1}; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C1.;"
71_013_scaffold_699_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11799..12326)
DNA (528bp) protein (176aa)
Phage N-6-adenine-methyltransferase {ECO:0000313|EMBL:EGE63651.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EGE63651.1};; TaxID=754082 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli STEC_7v.;"
Phage N-6-adenine-methyltransferase n=1 Tax=Escherichia coli M605 RepID=F4SX04_ECOLX
putative DNA N-6-adenine-methyltransferase from phage origin
71_013_scaffold_699_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12323..12763)
DNA (441bp) protein (147aa)
P21 prophage-derived protein NinB n=251 Tax=root RepID=NINB_ECOL6
putative ninB protein
Recombination protein ninB from phage origin {ECO:0000313|EMBL:CAR02504.1}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
71_013_scaffold_699_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12837..13127)
DNA (291bp) protein (97aa)
IleX, stx2A, stx2B, genes and 25 orf's n=122 Tax=root RepID=O32559_BP933
ren protein from phage origin
Uncharacterized protein {ECO:0000313|EMBL:KEJ51977.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
71_013_scaffold_699_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13124..13222)
DNA (99bp) protein (33aa)
Replication protein P (Fragment) n=1 Tax=Escherichia coli 0.1288 RepID=K3UL51_ECOLX
replication P family protein
Replication protein P {ECO:0000313|EMBL:ESP10597.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
Displaying 20 items

View Taxonomy