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71_013_scaffold_177

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_013_scaffold_177_1
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..2798)
DNA (2796bp) protein (932aa)
Translation initiation factor 2 n=1 Tax=Bifidobacterium longum E18 RepID=V6Y0A6_BIFLN
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
translation initiation factor IF-2; K02519 translation initiation factor IF-2
71_013_scaffold_177_2
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3098..4126)
DNA (1029bp) protein (343aa)
Transcription termination factor NusA n=2 Tax=Bifidobacterium RepID=B6XWT1_9BIFI
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A
71_013_scaffold_177_3
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4277..5173
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NVI0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI95887.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
71_013_scaffold_177_4
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5253..6359)
DNA (1107bp) protein (369aa)
LacI family transcriptional regulator n=1 Tax=Bifidobacterium breve RepID=UPI0002D95688
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30630.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_013_scaffold_177_5
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6435..6572)
DNA (138bp) protein (46aa)
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30629.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_013_scaffold_177_6
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6572..7207)
DNA (636bp) protein (212aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FFA9_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30629.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein
71_013_scaffold_177_7
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7289..8452)
DNA (1164bp) protein (388aa)
ABC transporter, solute-binding protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FFB0_9BIFI
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFI95884.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
71_013_scaffold_177_8
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8598..9869)
DNA (1272bp) protein (424aa)
glycoside hydrolase family protein; K01198 xylan 1,4-beta-xylosidase [EC:3.2.1.37]
Glycosyl hydrolase family 39 n=1 Tax=Clostridium sp. KLE 1755 RepID=U2C7M6_9CLOT
Putative glycoside hydrolase family protein {ECO:0000313|EMBL:KFI95883.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
71_013_scaffold_177_9
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10793..11746)
DNA (954bp) protein (318aa)
Putative oxidoreductase n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R3P8_BIFLM
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30625.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
oxidoreductase
71_013_scaffold_177_10
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11805..13352)
DNA (1548bp) protein (516aa)
Alpha-L-arabinosidase {ECO:0000313|EMBL:KFI95881.1}; EC=3.2.1.55 {ECO:0000313|EMBL:KFI95881.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
abfA5; abfa5; K01209 alpha-N-arabinofuranosidase [EC:3.2.1.55]
Exo-alpha-(1->6)-L-arabinofuranosidase n=11 Tax=Bifidobacterium RepID=16ABF_BIFLN
71_013_scaffold_177_11
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13556..14641)
DNA (1086bp) protein (362aa)
Transcriptional regulator LacI family n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NFV6_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30623.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
rbsr-type transcription regulator/ribose operon repressor
71_013_scaffold_177_12
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14707..15069)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000375FC49
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30622.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_013_scaffold_177_13
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15030..16208)
DNA (1179bp) protein (393aa)
alpha-N-arabinofuranosidase (EC:3.2.1.55); K01209 alpha-N-arabinofuranosidase [EC:3.2.1.55]
Alpha-L-arabinofuranosidase domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQI2_9CLOT
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30622.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_013_scaffold_177_14
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16240..17136)
DNA (897bp) protein (299aa)
ABC transporter permease n=1 Tax=Parascardovia denticolens IPLA 20019 RepID=I8ARW4_PARDN
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30621.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ABC transporter permease
71_013_scaffold_177_15
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17140..18063)
DNA (924bp) protein (308aa)
ABC transporter permease n=1 Tax=Metascardovia criceti RepID=UPI00035F8A6B
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30620.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ABC transporter permease; K02025 multiple sugar transport system permease protein
71_013_scaffold_177_16
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18147..19535)
DNA (1389bp) protein (463aa)
ABC transporter substrate-binding protein n=1 Tax=Alloscardovia omnicolens RepID=UPI0003B2FD4B
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30619.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
putative ABC transporter substrate-binding protein
71_013_scaffold_177_trna_1
unknown

Not on your lists

comp(20850..20934)
DNA (85bp)
transferRNA Ser
71_013_scaffold_177_17
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21092..22732)
DNA (1641bp) protein (547aa)
ABC transporter substrate-binding protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B54AD2
Peptides ABC transporter, solute-binding protein {ECO:0000313|EMBL:KFI95875.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
ABC transporter substrate-binding protein
71_013_scaffold_177_18
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22958..23665)
DNA (708bp) protein (236aa)
Transglutaminase, N-terminal domain protein n=8 Tax=Bifidobacterium RepID=E4NZ29_BIFBP
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ30616.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
putative cysteine protease
Displaying 19 items

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