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71_013_scaffold_219

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_013_scaffold_219_1
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(161..418)
DNA (258bp) protein (86aa)
30S ribosomal protein S15 n=3 Tax=Peptostreptococcus RepID=D3MRS6_9FIRM
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15
71_013_scaffold_219_2
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(714..1640)
DNA (927bp) protein (309aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" source="Peptostreptococcus anaerobius CAG:621.;"
Riboflavin biosynthesis protein RibF n=1 Tax=Peptostreptococcus anaerobius CAG:621 RepID=R5JMC7_9FIRM
riboflavin biosynthesis protein
71_013_scaffold_219_3
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1711..2682)
DNA (972bp) protein (324aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25]
tRNA pseudouridine synthase B n=1 Tax=Peptostreptococcus anaerobius VPI 4330 RepID=L1MWK6_9FIRM
71_013_scaffold_219_4
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2798..3817)
DNA (1020bp) protein (340aa)
Phosphoesterase RecJ domain protein n=1 Tax=Peptostreptococcus anaerobius CAG:621 RepID=R5JMY5_9FIRM
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:CCY50162.1}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" source="Peptostreptococcus anaerobius CAG:621.;"
RNA-binding protein; K06881 phosphoesterase RecJ domain-containing protein
71_013_scaffold_219_5
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3987..4334)
DNA (348bp) protein (116aa)
Ribosome-binding factor A n=3 Tax=Peptostreptococcus RepID=D3MRT3_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A
71_013_scaffold_219_6
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4357..6297)
DNA (1941bp) protein (647aa)
Translation initiation factor IF-2 n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MRT4_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2
71_013_scaffold_219_7
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6325..6642)
DNA (318bp) protein (106aa)
Ribosomal protein L7Ae n=2 Tax=Peptostreptococcus anaerobius RepID=D3MRT5_9FIRM
Ribosomal protein L7Ae {ECO:0000313|EMBL:EKX95500.1}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
ribosomal protein
71_013_scaffold_219_8
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6645..6926)
DNA (282bp) protein (94aa)
Uncharacterized protein n=2 Tax=Peptostreptococcus anaerobius RepID=D3MRT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFD05056.1}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
hypothetical protein; K07742 hypothetical protein
71_013_scaffold_219_9
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6941..8215)
DNA (1275bp) protein (425aa)
Transcription termination factor NusA n=2 Tax=Peptostreptococcus RepID=L1MWP2_9FIRM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
nusA; transcription elongation protein; K02600 N utilization substance protein A
71_013_scaffold_219_10
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8236..8700)
DNA (465bp) protein (155aa)
Ribosome maturation factor RimP n=1 Tax=Peptostreptococcus anaerobius VPI 4330 RepID=L1MW27_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
hypothetical protein; K09748 ribosome maturation factor RimP
71_013_scaffold_219_11
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9204..10862)
DNA (1659bp) protein (553aa)
ABC transporter, ATP-binding protein n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MRT9_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFD05148.1}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
mdlB; Multi Drug ABC transporter transmembrane subunit family protein
71_013_scaffold_219_12
unknown

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comp(10957..11121)
DNA (165bp) protein (55aa)

This feature has no annotations

71_013_scaffold_219_13
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11373..12623)
DNA (1251bp) protein (417aa)
Radical SAM domain protein n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MRU0_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:EFD05087.1}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
radical SAM superfamily protein; K06871 uncharacterized protein
71_013_scaffold_219_14
unknown

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comp(12649..13080)
DNA (432bp) protein (144aa)

This feature has no annotations

71_013_scaffold_219_15
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13204..13815)
DNA (612bp) protein (204aa)
Transcriptional regulatory protein ComA n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MRU1_9FIRM
Transcriptional regulatory protein ComA {ECO:0000313|EMBL:EFD05091.1}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
Transcriptional regulator DegU, LuxR family
71_013_scaffold_219_16
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13796..15397)
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MRU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFD05081.1}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
hypothetical protein; K14988 two-component system, NarL family, secretion system sensor histidine kinase SalK
71_013_scaffold_219_17
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15764..16237
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Peptostreptococcus anaerobius RepID=L1MXA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKX95629.1}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
71_013_scaffold_219_18
Peptostreptococcus anaerobius CAG:621, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16276..16881
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Peptostreptococcus anaerobius CAG:621 RepID=R5J5Y7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY49790.1}; TaxID=1263100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus; environmental samples.;" source="Peptostreptococcus anaerobius CAG:621.;"
71_013_scaffold_219_19
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16847..17371
DNA (525bp) protein (175aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MRU5_9FIRM
Prepilin-type cleavage/methylation N-terminal domain protein {ECO:0000313|EMBL:EFD05107.1}; TaxID=596329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius 653-L.;"
71_013_scaffold_219_20
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17544..18098
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Peptostreptococcus RepID=L1MXD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKX95626.1}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
71_013_scaffold_219_21
unknown

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comp(18033..18176)
DNA (144bp) protein (48aa)

This feature has no annotations

71_013_scaffold_219_22
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18176..19306)
DNA (1131bp) protein (377aa)
protease; K08303 putative protease [EC:3.4.-.-]
Peptidase, U32 family n=1 Tax=Peptostreptococcus anaerobius VPI 4330 RepID=L1MWY9_9FIRM
Peptidase, U32 family {ECO:0000313|EMBL:EKX95625.1}; TaxID=1035196 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus anaerobius VPI 4330 = DSM 2949.;"
Displaying 22 items

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