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71_013_scaffold_408

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_013_scaffold_408_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..1876
DNA (1875bp) protein (625aa)
if2; translation initiation factor IF-2 (EC:2.7.7.4); K02519 translation initiation factor IF-2
Translation initiation factor IF-2 n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q8K3_BIFDB
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
71_013_scaffold_408_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1981..2490
DNA (510bp) protein (170aa)
Ribosome-binding factor A n=2 Tax=Bifidobacterium dentium RepID=E0Q8L1_9BIFI
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A
71_013_scaffold_408_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2435..3559
DNA (1125bp) protein (375aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25]
tRNA pseudouridine synthase B n=2 Tax=Bifidobacterium dentium RepID=D2Q8K5_BIFDB
71_013_scaffold_408_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3556..4773
DNA (1218bp) protein (406aa)
ribF; riboflavin kinase/FMN adenylyltransferase (EC:2.7.7.2); K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
RibF Riboflavin kinase/FMN adenylyltransferase n=2 Tax=Bifidobacterium dentium RepID=D2Q8K6_BIFDB
Riboflavin kinase {ECO:0000313|EMBL:ETO98178.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_013_scaffold_408_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4865..5611)
DNA (747bp) protein (249aa)
amino acid transport ATP-binding protein (EC:3.6.3.30)
Amino acid transport ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=D2Q8K7_BIFDB
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETO98172.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
71_013_scaffold_408_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5608..6486)
DNA (879bp) protein (293aa)
ABC transporter, permease protein n=4 Tax=Bifidobacterium dentium RepID=B1S6C8_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:ETO98320.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
gluA; Glutamate transport ATP-binding protein gluA; K02029 polar amino acid transport system permease protein
71_013_scaffold_408_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6511..7377)
DNA (867bp) protein (289aa)
Solute-binding protein of ABC transporter system n=2 Tax=Bifidobacterium dentium RepID=D2Q8K9_BIFDB
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:ETO98218.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
ABC transporter substrate-binding protein; K02030 polar amino acid transport system substrate-binding protein
71_013_scaffold_408_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7528..7992)
DNA (465bp) protein (155aa)
Cupin family protein n=4 Tax=Bifidobacterium dentium RepID=B1S6C6_9BIFI
Cupin domain protein, PF06172 family {ECO:0000313|EMBL:ETO98109.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein; K09705 hypothetical protein
71_013_scaffold_408_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8061..9461)
DNA (1401bp) protein (467aa)
hydrolase (EC:3.5.4.28)
Amidohydrolase family protein n=2 Tax=Bifidobacterium dentium RepID=B1S6C5_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26445.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
71_013_scaffold_408_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9466..9624)
DNA (159bp) protein (53aa)
S-adenosylhomocysteine hydrolase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1]
S-adenosyl-L-homocysteine hydrolase, NAD binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q8K3_9BIFI
S-adenosyl-L-homocysteine hydrolase, NAD binding domain protein {ECO:0000313|EMBL:ETO98377.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Displaying 10 items

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