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71_013_scaffold_353

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_013_scaffold_353_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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3..1742
DNA (1740bp) protein (580aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
serine/threonine-protein kinase n=1 Tax=Varibaculum cambriense RepID=UPI0003B74996
Uncharacterized protein {ECO:0000313|EMBL:ETI81909.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
71_013_scaffold_353_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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1718..3538
DNA (1821bp) protein (607aa)
pknB; putative non-specific serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
serine/threonine protein kinase n=1 Tax=Varibaculum cambriense RepID=UPI0003B788B3
Uncharacterized protein {ECO:0000313|EMBL:ETI81911.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
71_013_scaffold_353_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3592..3786)
DNA (195bp) protein (65aa)
membrane protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B40879
Uncharacterized protein {ECO:0000313|EMBL:ETI81912.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
71_013_scaffold_353_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3774..4526)
DNA (753bp) protein (251aa)
sortase family protein; K07284 sortase A [EC:3.4.22.70]
sortase n=1 Tax=Varibaculum cambriense RepID=UPI0003B3B3E2
Sortase family protein {ECO:0000313|EMBL:ETI81913.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
71_013_scaffold_353_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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4680..4949
DNA (270bp) protein (90aa)
septation inhibitor protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B7B998
Cell division protein CrgA {ECO:0000256|HAMAP-Rule:MF_00631}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
71_013_scaffold_353_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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5186..6178
DNA (993bp) protein (331aa)
iolG1; myo-inositol 2-dehydrogenase (EC:1.1.1.18); K00010 myo-inositol 2-dehydrogenase [EC:1.1.1.18]
inositol 2-dehydrogenase n=1 Tax=Varibaculum cambriense RepID=UPI0003B78188
Uncharacterized protein {ECO:0000313|EMBL:ETI81915.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
71_013_scaffold_353_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6325..7188
DNA (864bp) protein (288aa)
myo-inositol catabolism protein; K03335 inosose dehydratase [EC:4.2.1.44]
inosose dehydratase n=1 Tax=Varibaculum cambriense RepID=UPI0003B70299
Uncharacterized protein {ECO:0000313|EMBL:ETI81916.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
71_013_scaffold_353_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(7469..7639)
DNA (171bp) protein (57aa)
UPI0003D5C78F related cluster n=1 Tax=unknown RepID=UPI0003D5C78F
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33
71_013_scaffold_353_trna_3
unknown

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comp(7708..7781)
DNA (74bp)
transferRNA Met
71_013_scaffold_353_trna_2
unknown

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comp(7811..7883)
DNA (73bp)
transferRNA Thr
71_013_scaffold_353_trna_1
unknown

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comp(7978..8059)
DNA (82bp)
transferRNA Tyr
71_013_scaffold_353_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8151..10481)
DNA (2331bp) protein (777aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B3C00F
Uncharacterized protein {ECO:0000313|EMBL:ETI81918.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
71_013_scaffold_353_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10643..11497
DNA (855bp) protein (285aa)
ABC transporter substrate-binding protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B6B507
ABC-type amino acid transport system, secreted component {ECO:0000313|EMBL:ETI81919.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter ATP-binding protein; K02030 polar amino acid transport system substrate-binding protein
Displaying 13 items

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