ggKbase home page

71_013_scaffold_597

Search features with annotation key words

Displaying 10 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_013_scaffold_597_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27..569
DNA (543bp) protein (181aa)
growth inhibitor PemK n=1 Tax=Varibaculum cambriense RepID=UPI0003B5F07B
Uncharacterized protein {ECO:0000313|EMBL:ETI81793.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
71_013_scaffold_597_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

803..1024
DNA (222bp) protein (74aa)
translation initiation factor IF-1 n=1 Tax=Varibaculum cambriense RepID=UPI0003B53AE2
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
translation initiation factor IF-1; K02518 translation initiation factor IF-1
71_013_scaffold_597_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1068..1181
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0YUN0_9ACTO
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rpmJ; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
71_013_scaffold_597_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


1309..1686
DNA (378bp) protein (126aa)
30S ribosomal protein S13 n=1 Tax=Varibaculum cambriense RepID=UPI0003B444E0
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
71_013_scaffold_597_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


1732..2130
DNA (399bp) protein (133aa)
30S ribosomal protein S11 n=1 Tax=Varibaculum cambriense RepID=UPI0003B66D2B
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11
71_013_scaffold_597_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2293..3294
DNA (1002bp) protein (334aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
DNA-directed RNA polymerase subunit alpha n=1 Tax=Varibaculum cambriense RepID=UPI0003B694F0
71_013_scaffold_597_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


3352..3927
DNA (576bp) protein (192aa)
50S ribosomal protein L17 n=1 Tax=Varibaculum cambriense RepID=UPI0003B7033F
50S ribosomal protein L17 {ECO:0000256|RuleBase:RU000661}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
71_013_scaffold_597_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4119..4877
DNA (759bp) protein (253aa)
ROK family protein; K00886 polyphosphate glucokinase [EC:2.7.1.63]
ROK family transcriptional regulator n=1 Tax=Varibaculum cambriense RepID=UPI0003B7A8E0
Uncharacterized protein {ECO:0000313|EMBL:ETI81786.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
71_013_scaffold_597_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4877..5743
DNA (867bp) protein (289aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
tRNA pseudouridine synthase A n=1 Tax=Varibaculum cambriense RepID=UPI0003B5E452
71_013_scaffold_597_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5765..6577)
DNA (813bp) protein (271aa)
alpha-galactosidase n=1 Tax=Varibaculum cambriense RepID=UPI0003B63ADC
Uncharacterized protein {ECO:0000313|EMBL:ETI81784.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
alpha-galactosidase
Displaying 10 items

View Taxonomy