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71_013_scaffold_815

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_013_scaffold_815_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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3..314
DNA (312bp) protein (104aa)
2-oxoglutarate dehydrogenase, E1 subunit; K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
alpha-ketoglutarate decarboxylase n=1 Tax=Varibaculum cambriense RepID=UPI0003B54CD4
Uncharacterized protein {ECO:0000313|EMBL:ETI83057.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
71_013_scaffold_815_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(599..886)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B79991
Uncharacterized protein {ECO:0000313|EMBL:ETI83056.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
71_013_scaffold_815_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(886..1593)
DNA (708bp) protein (236aa)
RNA polymerase sigma factor RpoE n=1 Tax=Varibaculum cambriense RepID=UPI0003B30644
ECF-family sigma factor H {ECO:0000313|EMBL:ETI83055.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
sigH; ECF-family sigma factor H; K03088 RNA polymerase sigma-70 factor, ECF subfamily
71_013_scaffold_815_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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1679..2065
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B782E7
Uncharacterized protein {ECO:0000313|EMBL:ETI83054.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
71_013_scaffold_815_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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2069..3397
DNA (1329bp) protein (443aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Varibaculum cambriense RepID=UPI0003B58EC7
71_013_scaffold_815_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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3384..4385
DNA (1002bp) protein (334aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
GTPase EngC; K06949 ribosome biogenesis GTPase [EC:3.6.1.-]
GTPase n=1 Tax=Varibaculum cambriense RepID=UPI0003B3D43E
71_013_scaffold_815_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(4347..4922)
DNA (576bp) protein (192aa)
histidinol-phosphate phosphatase; K05602 histidinol-phosphatase [EC:3.1.3.15]
histidinol-phosphatase n=1 Tax=Varibaculum cambriense RepID=UPI0003B37833
Uncharacterized protein {ECO:0000313|EMBL:ETI83051.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Displaying 7 items

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