ggKbase home page

71_013_scaffold_539_1

Organism: 71_013_Varibaculum_cambriense_54_7

near complete RP 51 / 55 BSCG 51 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: 1..483

Top 3 Functional Annotations

Value Algorithm Source
hupA; hydrogenase (EC:1.12.99.6); K06282 hydrogenase small subunit [EC:1.12.99.6] similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 158.0
  • Bit_score: 266
  • Evalue 4.80e-69
UPI0003D5D72A related cluster n=1 Tax=unknown RepID=UPI0003D5D72A similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 160.0
  • Bit_score: 322
  • Evalue 2.30e-85
Uncharacterized protein {ECO:0000313|EMBL:ETI82884.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 160.0
  • Bit_score: 322
  • Evalue 3.30e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 483
CCCCATTTTGATGCCGGGCAATTCGTACGTACCTTTGACGATGCCGGAGCTCGCGAAGGTTGGTGCCTGTACGATGTGGGCTGTAAAGGCCCCTCTACCTTTAGCCCCTGCCCGATTGTGCAGTGGAATATGAAAGCAGGTTGGCCGATTGGTGCCGGTCACCCCTGTATCGGCTGCACCGAGCGTGACTTTTTCGACCGTTTCTCACCGTTCTATCAAGTCCTGCCAAACGTCCCCGGATTCGGAGTGGAAGCTACTGCCGAGAAGGTGGGATTGGGCTTTACCGGAGCGGTGGCGGCCGGTGTCGCTGTGCACGCGGGAGTTACCGCCGTTAGAGCTGCAGCAGACCGAAAAGCCACCCGGAATTCTCCGATGGCTGCCTTTGGGGACGCTACCGATGTTGATACCGAACCACCTTCCCCAGAGGAAACTCCCAACGCAGAAGTTCCTAAGGACAGCGAAAAGAACAGTGAGGCGAACTAA
PROTEIN sequence
Length: 161
PHFDAGQFVRTFDDAGAREGWCLYDVGCKGPSTFSPCPIVQWNMKAGWPIGAGHPCIGCTERDFFDRFSPFYQVLPNVPGFGVEATAEKVGLGFTGAVAAGVAVHAGVTAVRAAADRKATRNSPMAAFGDATDVDTEPPSPEETPNAEVPKDSEKNSEAN*