ggKbase home page

71_013_scaffold_539_2

Organism: 71_013_Varibaculum_cambriense_54_7

near complete RP 51 / 55 BSCG 51 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: 483..2225

Top 3 Functional Annotations

Value Algorithm Source
hupB; hydrogenase (EC:1.12.99.6); K06281 hydrogenase large subunit [EC:1.12.99.6] similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 580.0
  • Bit_score: 1091
  • Evalue 0.0
hydrogenase 2 large subunit n=1 Tax=Varibaculum cambriense RepID=UPI0003B4D1A6 similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 580.0
  • Bit_score: 1197
  • Evalue 0.0
Uncharacterized protein {ECO:0000313|EMBL:ETI82885.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 580.0
  • Bit_score: 1167
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1743
ATGGCTGAAAAAGTAGTTATCGACCCGTTAACCCGCATTGAGGGACATCTGCGTATCGAGATGGAAACCGAAGGCGAGCAGATTAAAAAGGCCTGGAGCGTTAGTACCCAGTTTCGAGGGATCGAGACTATCGTCCAAAATCGCGATCCTCGGGATGTATGGGCCTTCGTCCAACGTATTTGTGGGGTTTGCACTTCGGTTCACGCGATTGCTTCCATTACCGCAGTAGAAGATGCTATCGGTTCCAATCCCCCAGAAAATGCGCGGTTGATCCGCTCGCTGGTTTTGGGGTCACAAGAAATCCAGGATCACGTGATTCACTTCTATCACTTGCATGCTTTGGACTTCGTTAATGTTCCCAATGCGGCGAAGGCAGATCCGGCTAAAGCACTGGAGTTTGCCCACTCCATCGGTTCTAAATGGCGGGGCAATAACCTCAAGCGCTTCACCGAGGTTCGGGACACGGTGAAGAAAATCCTGGAGTCCGGACAGCTTTCGGTGTTTACCGGCGGGTACTGGGATCACCCAGATTATCGTCTTCCTCCCGAAGCAGATTTGATGTGCGTGGCGCACTATCTGGATGCTTTAGAGTTCCAACGCTCCATGATTCGTATCAATACGGTATTCGGGGGTAAGAACCCGCATCCGAACTTCTTGGTGGGCGGCATGGCCTGCTCGATTGATCCGCAGTCTTCTGAATCCATTAACCAGGTGCAAATGGATCAAGTAAAAACCTGGGTAGAAGAGATCAACGAGTTCGTCAAGGATTGTTACTACCCGGATATTTTAGCCTTGGGTGGGGTTTACAAAGACTACTTCGATATTGGCGCTACCCATCCAAATTACTTGGCAGTGGGTCTGGCCGGATCGATGTTTGCGGGCGACCCCAATAAGTCTCGAGTGTCATCGCCGCACACCGCCATTAAGCCGGGAGTCATATTCGACGATGATTTAACCAAGGTTCATCCTTTCGACCCCCACAAGATTGAAGAGTTTATTACTTCTGCTTGGTATGAGTATTCGGTGGGAGACAAGAAGGGACTAACTCCCGACAAGGGAGAGACCACGGTAAAATACACCGGTCCGCAACCGCCTTTCAAATGGCTAGGTGACCGTGATAAATACACTTGGTCGAAAGCTCCTCGCTATGACGGTAAGCCGATGCAGGTCGGCCCGGTCGCGCGGATGCTTTTGGCCTATGCCCAAGGATACGAACCGGTTAAGAAGCTGCTCGACGGAGCGATAGCTACCTTAGGTATTACCCCCAAACAGATTAACTCTACGATGGGACGGACTTTTGCTCGGGCGGCGGAAGCAGTAGTGTCGGCCGATCTCATGCGCGAGGATTACAATGCTCTGGTTAAGAACATCAAGGAAGGCGATATTGATGTTTTCGATGCCAGTAAGTGGGAGCCCAGTCGTTGGCCGGCCGAAGCGCAAGGATATGCCTTCATTGAAGTTGCCCGGGGAGACCTATCGCACTGGGTATCAATCAAGGATGGAAAGGTGGATCGCTACCAAGCGGTAGTTCCTACTACCTGGCTGGCAGGAGGGCGCGACGCTCAAGGAGTTACCGGCCCCTACGAGGAATCCCTGATGGGGACAGGAACTCATCCGCTGGTGGATCCCAAGGCCCCCCTGGAACCGATGCGTACTATTCATTCCTATGATCCCTGTATGTCCTGTGGGGTTCACATTCTCGATCCCGATGGAAATCTTCTGGGTGAGGCGGTAACGTCATGA
PROTEIN sequence
Length: 581
MAEKVVIDPLTRIEGHLRIEMETEGEQIKKAWSVSTQFRGIETIVQNRDPRDVWAFVQRICGVCTSVHAIASITAVEDAIGSNPPENARLIRSLVLGSQEIQDHVIHFYHLHALDFVNVPNAAKADPAKALEFAHSIGSKWRGNNLKRFTEVRDTVKKILESGQLSVFTGGYWDHPDYRLPPEADLMCVAHYLDALEFQRSMIRINTVFGGKNPHPNFLVGGMACSIDPQSSESINQVQMDQVKTWVEEINEFVKDCYYPDILALGGVYKDYFDIGATHPNYLAVGLAGSMFAGDPNKSRVSSPHTAIKPGVIFDDDLTKVHPFDPHKIEEFITSAWYEYSVGDKKGLTPDKGETTVKYTGPQPPFKWLGDRDKYTWSKAPRYDGKPMQVGPVARMLLAYAQGYEPVKKLLDGAIATLGITPKQINSTMGRTFARAAEAVVSADLMREDYNALVKNIKEGDIDVFDASKWEPSRWPAEAQGYAFIEVARGDLSHWVSIKDGKVDRYQAVVPTTWLAGGRDAQGVTGPYEESLMGTGTHPLVDPKAPLEPMRTIHSYDPCMSCGVHILDPDGNLLGEAVTS*