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71_013_scaffold_652_6

Organism: 71_013_Varibaculum_cambriense_54_7

near complete RP 51 / 55 BSCG 51 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(5380..6087)

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor NusA n=1 Tax=Varibaculum cambriense RepID=UPI0003B7058F similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 235.0
  • Bit_score: 457
  • Evalue 6.90e-126
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 235.0
  • Bit_score: 440
  • Evalue 2.10e-120
NusA antitermination factor; K02600 N utilization substance protein A similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 225.0
  • Bit_score: 287
  • Evalue 3.90e-75

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Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 708
CTGCGGGAAGCCGAGGACGAGCAGGTACTGGGCTCTTTTAGAGATAAAAAGGGCGAAGTGGTTTCCGGGATTATTCAGCAGAGCCGGGATAAAGATGTAGTAGTGGTCAAAGTCGGCGAATTTGAGGCGGTTCTACCGAAAGCCGAACAGGTTCCGGGGGAAAAATACCACCATGGCCAGTGGATCCGGGCGGTAGTGATAAAAACTGCGCTTGGAGAAAAAGGGGCACGGATCGAGGTTTCACGCCGTCATCCCGACCTGGTGCGCGGACTATTTGCGCGAGAAGTCCCGGAGATCACTTCTGGAGATGTGGTTATTGAGTCGGTGGCGCGGGAAGCTGGTTACCGTACCAAGATCGCGGTGCGTTCTACTCGTCCCAATATCAATGCTAAGGGGGCTTGTATTGGGCCGATGGGGCGGCGCGTGCGGGCAGTCATGAATGAACTAAACCACGAAAAAATCGACATTATTGACTATTCCGAGGACGTGGCTACTTTTGTCGCTAATGCGCTCTCACCTGCGCATGTTAGCTCTGTCACGGTAGAACCGGCCGAACATGTATTAGCACATGTGGTAGTGCCAGATTTCCAACTGTCGTTGGCTATCGGTAAAGAAGGACAAAATGCGCGTCTAGCTGCCCGTTTAACGGGAGCCAAGATTGATATTAGGTCTGATATGGATCCGGAAACGACTAGTGAGGAAGCTTAA
PROTEIN sequence
Length: 236
LREAEDEQVLGSFRDKKGEVVSGIIQQSRDKDVVVVKVGEFEAVLPKAEQVPGEKYHHGQWIRAVVIKTALGEKGARIEVSRRHPDLVRGLFAREVPEITSGDVVIESVAREAGYRTKIAVRSTRPNINAKGACIGPMGRRVRAVMNELNHEKIDIIDYSEDVATFVANALSPAHVSSVTVEPAEHVLAHVVVPDFQLSLAIGKEGQNARLAARLTGAKIDIRSDMDPETTSEEA*