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71_013_scaffold_652

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_013_scaffold_652_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..396)
DNA (396bp) protein (132aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
FMN adenylyltransferase; riboflavin kinase (EC:2.7.1.26 2.7.7.2); K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
riboflavin kinase n=1 Tax=Varibaculum cambriense RepID=UPI0003B653BC
71_013_scaffold_652_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(400..552)
DNA (153bp) protein (51aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B38050
Uncharacterized protein {ECO:0000313|EMBL:ETI82796.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
71_013_scaffold_652_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(563..1594)
DNA (1032bp) protein (344aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
putative tRNA-pseudouridine synthase I (EC:5.4.99.12); K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25]
tRNA pseudouridine synthase B n=1 Tax=Varibaculum cambriense RepID=UPI0003B57379
71_013_scaffold_652_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1607..2185)
DNA (579bp) protein (193aa)
ribosome-binding factor A n=1 Tax=Varibaculum cambriense RepID=UPI0003B67F2A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ribosome-binding factor A; K02834 ribosome-binding factor A
71_013_scaffold_652_5
Actinomyces neuii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2255..5071)
DNA (2817bp) protein (939aa)
translation initiation factor IF-2 n=1 Tax=Varibaculum cambriense RepID=UPI0003B53579
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=888439 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces neuii BVS029A5.;"
translation initiation factor IF-2; K02519 translation initiation factor IF-2
71_013_scaffold_652_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(5380..6087)
DNA (708bp) protein (236aa)
transcription elongation factor NusA n=1 Tax=Varibaculum cambriense RepID=UPI0003B7058F
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
NusA antitermination factor; K02600 N utilization substance protein A
Displaying 6 items

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