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ar11r2_scaffold_529

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar11r2_scaffold_529_1
Candidatus Thiodictyon syntrophicum, Thiodictyon, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..123)
DNA (123bp) protein (41aa)
LysR family transcriptional regulator id=12496248 bin=THIO_MID species=unknown genus=Nitrobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
LysR family transcriptional regulator
Transcriptional regulator LysR family {ECO:0000313|EMBL:AFJ79545.1}; Transcriptional regulator LysR family protein CbbR {ECO:0000313|EMBL:AFH41836.1}; TaxID=572262 species="Bacteria; Proteobacteria; G
ar11r2_scaffold_529_2
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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518..1939
DNA (1422bp) protein (474aa)
rbcL; Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (RuBisCO large subunit) (EC:4.1.1.39) id=12496249 bin=THIO_MID species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ribulose-bisphosphate carboxylase (EC:4.1.1.39)
Ribulose bisphosphate carboxylase large chain {ECO:0000255|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000255|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000255|HAMAP-Rule:MF_01338};; TaxID=7
ar11r2_scaffold_529_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2018..2344
DNA (327bp) protein (109aa)
ribulose-bisphosphate carboxylase (EC:4.1.1.39); K01602 ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] id=12496250 bin=THIO_MID species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Ribulose 1,5-bisphosphate carboxylase small subunit {ECO:0000313|EMBL:ABE64928.1}; EC=4.1.1.39 {ECO:0000313|EMBL:ABE64928.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhiz
ribulose bisphosphate carboxylase small subunit
ar11r2_scaffold_529_4
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2503..5355
DNA (2853bp) protein (951aa)
carboxysome shell protein id=12496251 bin=THIO_MID species=Thiomonas intermedia genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
carboxysome shell protein
Carboxysome shell protein CsoS2 {ECO:0000313|EMBL:ABA05244.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter w
ar11r2_scaffold_529_5
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5369..6862
DNA (1494bp) protein (498aa)
carboxysome shell carbonic anhydrase id=12496252 bin=THIO_MID species=Thiomonas intermedia genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
csoS3; Carboxysome structural polypeptide
Carboxysome structural polypeptide {ECO:0000313|EMBL:CAZ86894.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (st
ar11r2_scaffold_529_6
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6891..7148
DNA (258bp) protein (86aa)
Carboxysome polypeptide n=2 Tax=Thiomonas RepID=D6CQK4_THIA3
Carboxysome polypeptide
Carboxysome peptide A {ECO:0000313|EMBL:ADG29532.1}; Carboxysome polypeptide {ECO:0000313|EMBL:AAD02449.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomona
ar11r2_scaffold_529_7
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7149..7394
DNA (246bp) protein (82aa)
Carboxysome polypeptide n=2 Tax=Thiomonas RepID=D6CQK5_THIA3
carboxysome peptide B
Carboxysome polypeptide {ECO:0000313|EMBL:CAZ86896.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22
ar11r2_scaffold_529_8
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7502..7798
DNA (297bp) protein (99aa)
microcompartments protein
microcompartments protein id=12496255 bin=THIO_MID species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Carboxysome structural polypeptide {ECO:0000313|EMBL:AAD02451.1}; CsoS1C {ECO:0000313|EMBL:AAC24754.1}; Microcompartments protein {ECO:0000313|EMBL:ADG29534.1}; TaxID=75379 species="Bacteria; Proteoba
ar11r2_scaffold_529_9
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7838..8134
DNA (297bp) protein (99aa)
Carboxysome structural polypeptide n=2 Tax=Thiomonas RepID=D6CQK8_THIA3
microcompartments protein
Carboxysome structural polypeptide {ECO:0000313|EMBL:CAZ86899.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (st
ar11r2_scaffold_529_10
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8186..8527
DNA (342bp) protein (114aa)
Carboxysome structural polypeptide n=2 Tax=Thiomonas RepID=D6CQK8_THIA3
microcompartments protein
Carboxysome structural polypeptide {ECO:0000313|EMBL:CAZ86899.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (st
ar11r2_scaffold_529_11
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8540..8992
DNA (453bp) protein (151aa)
ferritin Dps family protein; K03594 bacterioferritin id=12496256 bin=THIO_MID species=Thiomonas intermedia genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ferritin Dps family protein
Ferritin Dps family protein {ECO:0000313|EMBL:ADG29537.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (T
ar11r2_scaffold_529_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8985..9254
DNA (270bp) protein (90aa)
hypothetical protein id=12496257 bin=THIO_MID species=Thiomonas intermedia genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64935.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
ar11r2_scaffold_529_13
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9257..9892
DNA (636bp) protein (212aa)
Cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein id=12496258 bin=THIO_MID species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative Cobyrinic acid a,c-diamide synthase cbiA
Putative Cobyrinic acid a,c-diamide synthase cbiA {ECO:0000313|EMBL:CAZ86902.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas ars
ar11r2_scaffold_529_14
unknown

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9889..10251
DNA (363bp) protein (121aa)

This feature has no annotations

ar11r2_scaffold_529_15
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10273..11199
DNA (927bp) protein (309aa)
CbbQ/NirQ/NorQ domain-containing protein; K04748 nitric oxide reductase NorQ protein id=12496260 bin=THIO_MID species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
cbbQ1; post-translational RubisCO activator CbbQ
CbbQ/NirQ/NorQ domain protein {ECO:0000313|EMBL:ADG29541.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12)
ar11r2_scaffold_529_16
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11252..13606
DNA (2355bp) protein (785aa)
von Willebrand factor type A id=12496261 bin=THIO_MID species=Thiomonas intermedia genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
cbbO1; Rubisco activation protein CbbO
Rubisco activation protein CbbO {ECO:0000313|EMBL:CAZ86905.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strai
ar11r2_scaffold_529_17
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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13634..14212
DNA (579bp) protein (193aa)
Calcium/calmodulin dependent protein kinase II association-domain protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L112_HALNC
calcium/calmodulin dependent protein kinase II association-domain-containing protein
Calcium/calmodulin dependent protein kinase II association-domain protein {ECO:0000313|EMBL:ACX96385.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobaci
ar11r2_scaffold_529_18
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14265..14903
DNA (639bp) protein (213aa)
hypothetical protein id=12496262 bin=THIO_MID species=Nitrobacter sp. Nb-311A genus=Nitrobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EAQ35863.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
microcompartments protein
ar11r2_scaffold_529_19
R_Methylotenera_45_14, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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15125..15655
DNA (531bp) protein (177aa)
UPF0114 protein M301_2661 n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DNY5_METS0
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Methylotenera_45_14_curated
hypothetical protein
ar11r2_scaffold_529_20
unknown

Not on your lists

15699..15983
DNA (285bp) protein (95aa)

This feature has no annotations

ar11r2_scaffold_529_21
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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16237..17562
DNA (1326bp) protein (442aa)
Sulphate transporter n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DAY0_THICA
sulfate transporter
Sulphate transporter {ECO:0000313|EMBL:AEG32313.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimi
ar11r2_scaffold_529_22
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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17593..17898
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFQ4_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98552.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
ar11r2_scaffold_529_23
Endozoicomonas montiporae, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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17945..18133
DNA (189bp) protein (63aa)
riboflavin synthase subunit alpha n=1 Tax=Nevskia ramosa RepID=UPI0003B5634B
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:KEQ13004.1}; TaxID=1027273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoi
riboflavin synthase subunit alpha
Displaying 23 items

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