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ar11r2_scaffold_534

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar11r2_scaffold_534_1
unknown

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140..412
DNA (273bp) protein (91aa)

This feature has no annotations

CHIMERIC CONTIG?? Jill Banfield (5/19/15)
ar11r2_scaffold_534_2
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

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399..848
DNA (450bp) protein (150aa)
Uncharacterized protein {ECO:0000313|EMBL:KIM05930.1}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
ar11r2_scaffold_534_3
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

845..1786
DNA (942bp) protein (314aa)
Alpha-2-macroglobulin n=1 Tax=Campylobacter concisus ATCC 51561 RepID=U2FG06_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIM05930.1}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
alpha-2-macroglobulin family protein
ar11r2_scaffold_534_4
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

1800..2786
DNA (987bp) protein (329aa)
Alpha-2-macroglobulin family N-terminal region domain protein n=1 Tax=Campylobacter coli LMG 9854 RepID=H7V4V6_CAMCO
Uncharacterized protein {ECO:0000313|EMBL:KIM05930.1}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
alpha-2-macroglobulin
ar11r2_scaffold_534_5
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

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2959..3159
DNA (201bp) protein (67aa)
50S ribosomal protein L31 n=3 Tax=Campylobacter RepID=RL31_CAMFF
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp.
rpmE; 50S ribosomal protein L31
ar11r2_scaffold_534_6
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

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3193..4011
DNA (819bp) protein (273aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6Q6S2_SULNB
hypothetical protein
ar11r2_scaffold_534_7
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

4072..4749
DNA (678bp) protein (226aa)
RNA methyltransferase n=1 Tax=Sulfurovum sp. AR RepID=I2K571_9PROT
RNA methyltransferase {ECO:0000313|EMBL:KIM04878.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
RNA methyltransferase
ar11r2_scaffold_534_8
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

4746..5480
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Sulfurovum sp. AR RepID=I2K570_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIM04879.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
hypothetical protein
ar11r2_scaffold_534_9
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

5490..6722
DNA (1233bp) protein (411aa)
aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase n=1 Tax=Sulfurovum sp. AR RepID=I2K569_9PROT
Glutamate-pyruvate aminotransferase {ECO:0000313|EMBL:KIM04880.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
ar11r2_scaffold_534_10
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

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6715..7980
DNA (1266bp) protein (422aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579, ECO:0000313|EMBL:KIM04881.1}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacter
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Sulfurovum sp. AR RepID=I2K568_9PROT
ar11r2_scaffold_534_11
Sulfurovum sp. AS07-7, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

8113..9459
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Capnocytophaga granulosa ATCC 51502 RepID=S2VWJ7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIM04882.1}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;"
OmpA/MotB domain-containing protein
ar11r2_scaffold_534_12
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9497..10510)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Musa acuminata subsp. malaccensis RepID=M0S7L3_MUSAM
Uncharacterized protein {ECO:0000313|EMBL:KIM08024.1}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
hypothetical protein
ar11r2_scaffold_534_13
unknown

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comp(10500..10670)
DNA (171bp) protein (57aa)

This feature has no annotations

ar11r2_scaffold_534_14
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

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comp(10723..12450)
DNA (1728bp) protein (576aa)
Outer membrane receptor protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C682_9FLAO
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
hypothetical protein
ar11r2_scaffold_534_15
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12498..15515)
DNA (3018bp) protein (1006aa)
Uncharacterized protein n=1 Tax=Kordia algicida OT-1 RepID=A9EDH1_9FLAO
TPR-domain containing protein Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
tetratricopeptide repeat protein
ar11r2_scaffold_534_16
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15769..16626)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BQT9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHQ04258.1}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 1574
hypothetical protein
ar11r2_scaffold_534_17
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16610..17116)
DNA (507bp) protein (169aa)
mrsB1; peptide-methionine (S)-S-oxide reductase MrsB1 (EC:1.8.4.11); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated
Methionine sulfoxide reductase B n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J5E8_9FLAO
methionine-R-sulfoxide reductase
ar11r2_scaffold_534_18
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17128..17988)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00037B7329
Alpha/beta hydrolase {ECO:0000313|EMBL:KGO85414.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli
alpha/beta hydrolase
ar11r2_scaffold_534_19
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18106..18924
DNA (819bp) protein (273aa)
peptidase M48 n=1 Tax=Polaribacter franzmannii RepID=UPI00037A5FD8
peptidase family M48 Tax=CG_Flavo_02
peptidase family M48
ar11r2_scaffold_534_20
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18958..19641
DNA (684bp) protein (228aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
endonuclease III n=1 Tax=Flavobacteriaceae bacterium P7-3-5 RepID=UPI00035DD637
ar11r2_scaffold_534_21
unknown

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comp(19674..19814)
DNA (141bp) protein (47aa)

This feature has no annotations

ar11r2_scaffold_534_22
Lacinutrix sp. 5H-3-7-4, Lacinutrix, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(19859..20446)
DNA (588bp) protein (196aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GH90_LACS5
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEH02215.1}; TaxID=983544 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Lacinutrix.;" source=
ar11r2_scaffold_534_23
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

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comp(20824..21690)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI000381EF59
FKBP-type peptidylprolyl isomerase Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
hypothetical protein
ar11r2_scaffold_534_24
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21848..22210
DNA (363bp) protein (121aa)
Ribosome-associated heat shock protein implicated in recycling of 50S subunit n=1 Tax=Joostella marina DSM 19592 RepID=I3C6F0_9FLAO
Ribosome-associated heat shock protein implicated in recycling of 50S subunit {ECO:0000313|EMBL:EIJ39193.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacte
RNA-binding protein
ar11r2_scaffold_534_25
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

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22218..22799
DNA (582bp) protein (194aa)
tpm; thiopurine S-methyltransferase (EC:2.1.1.67) Tax=GWF1_Flavobacteria_32_7_curated
Thiopurine S-methyltransferase id=2541920 bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
Thiopurine S-methyltransferase (TPMT)
ar11r2_scaffold_534_26
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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22826..23323
DNA (498bp) protein (166aa)
Uracil phosphoribosyltransferase/pyrimidine operon attenuation protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S8B0_9FLAO
Phosphoribosyltransferase {ECO:0000313|EMBL:KGO94018.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium e
phosphoribosyltransferase
ar11r2_scaffold_534_27
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(23315..23497)
DNA (183bp) protein (61aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavoba
Displaying 27 items

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