ggKbase home page

ar11r2_scaffold_1405

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar11r2_scaffold_1405_1
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

328..894
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037B53AC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP56431.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
ar11r2_scaffold_1405_2
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1095..1430)
DNA (336bp) protein (112aa)
Thioredoxin n=1 Tax=Beggiatoa sp. PS RepID=A7C351_9GAMM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
thioredoxin
ar11r2_scaffold_1405_3
unknown

Not on your lists

1829..2173
DNA (345bp) protein (115aa)

This feature has no annotations

ar11r2_scaffold_1405_4
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2355..3257)
DNA (903bp) protein (301aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Beggiatoa alba B18LD RepID=I3CBK7_9GAMM
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:EIJ41000.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;
serine/threonine protein kinase
ar11r2_scaffold_1405_5
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3318..5507)
DNA (2190bp) protein (730aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiop
Multi-sensor signal transduction histidine kinase n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UMG5_9CYAN
sensor histidine kinase
ar11r2_scaffold_1405_6
unknown

Not on your lists

comp(5868..6386)
DNA (519bp) protein (173aa)

This feature has no annotations

ar11r2_scaffold_1405_7
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6697..7713
DNA (1017bp) protein (339aa)
DNA polymerase III, delta prime subunit n=1 Tax=Beggiatoa sp. PS RepID=A7BV86_9GAMM
DNA polymerase III, delta prime subunit {ECO:0000313|EMBL:EDN69548.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiato
DNA polymerase III subunit delta'
ar11r2_scaffold_1405_8
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7716..8087
DNA (372bp) protein (124aa)
Tfp pilus assembly protein PilZ n=1 Tax=Beggiatoa alba B18LD RepID=I3CCC6_9GAMM
Tfp pilus assembly protein PilZ
Tfp pilus assembly protein PilZ {ECO:0000313|EMBL:BAP56477.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica
ar11r2_scaffold_1405_9
unknown

Not on your lists

comp(8270..8533)
DNA (264bp) protein (88aa)

This feature has no annotations

ar11r2_scaffold_1405_10
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9135..9740)
DNA (606bp) protein (202aa)
CRISPR-associated protein Cas4 n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2DYJ1_9GAMM
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:EGV32618.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococc
CRISPR-associated protein, Cas4 family
ar11r2_scaffold_1405_11
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9750..10055)
DNA (306bp) protein (102aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotricha
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2DYJ2_9GAMM
CRISPR-associated protein, Cas2 family
ar11r2_scaffold_1405_12
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10052..11038)
DNA (987bp) protein (329aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales;
CRISPR-associated endonuclease Cas1 n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YH42_THIV6
CRISPR-associated protein, Cas1 family
ar11r2_scaffold_1405_13
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11139..13820)
DNA (2682bp) protein (894aa)
Acyl-CoA synthetase (NDP forming) n=1 Tax=Beggiatoa alba B18LD RepID=I3CJG9_9GAMM
Acyl-CoA synthetase (NDP forming) {ECO:0000313|EMBL:EIJ43762.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" sou
GCN5-related N-acetyltransferase rbh
ar11r2_scaffold_1405_14
unknown

Not on your lists

comp(13909..13986)
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 14 items

View Taxonomy