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ar11r2_scaffold_333

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar11r2_scaffold_333_1
Clostridium ljungdahlii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(313..1317)
DNA (1005bp) protein (335aa)
Predicted ABC-type Fe3+-siderophore transport system, permease component n=2 Tax=Clostridium RepID=D8GN41_CLOLD
Fe3+-siderophore ABC transporter permease
Predicted ABC-type Fe3+-siderophore transport system, permease component {ECO:0000313|EMBL:ADK13665.1}; TaxID=748727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
ar11r2_scaffold_333_2
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

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comp(1334..2512)
DNA (1179bp) protein (393aa)
Cys/Met metabolism pyridoxal-phosphate-dependent protein id=1925589 bin=GWE2_Bacteroidetes_29_8 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein Tax=GWE2_Bacteroidetes_29_8_curated
hypothetical protein
ar11r2_scaffold_333_3
CG_Bacteroid_01, Bacteroidetes, Bacteria

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comp(2553..4013)
DNA (1461bp) protein (487aa)
membrane protein Tax=CG_Bacteroid_01
Membrane protein involved in the export of O-antigen and teichoic acid id=3890958 bin=GWF2_Bacteroidetes_29_10 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
hypothetical protein
ar11r2_scaffold_333_4
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4029..6791)
DNA (2763bp) protein (921aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1262909 species="Bacteria; Bacter
leuS; Leucine-tRNA ligase (EC:6.1.1.4)
leucyl-tRNA synthetase n=1 Tax=Butyricimonas synergistica RepID=UPI0003618BE3
ar11r2_scaffold_333_5
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6880..7821)
DNA (942bp) protein (314aa)
gliding motility associated protein GldN id=2191582 bin=GWE2_Bacteroidetes_42_42 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
gliding motility protein GldN
Tax=BJP_08E140C01_Bacteriodales_41_10
ar11r2_scaffold_333_6
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

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comp(7838..9463)
DNA (1626bp) protein (542aa)
Gliding motility-associated protein GldM id=3522501 bin=GWF2_Bacteroidetes_43_63 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
gliding motility-associated protein GldM Tax=GWF2_Bacteroidetes_43_63_curated
gliding motility-associated protein GldM
ar11r2_scaffold_333_7
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9517..10245)
DNA (729bp) protein (243aa)
gliding motility-associated protein GldL id=3522506 bin=GWF2_Bacteroidetes_43_63 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
gliding motility-associated protein GldL
Tax=BJP_08E140C01_Bacteriodales_41_10
ar11r2_scaffold_333_8
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

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comp(10302..11777)
DNA (1476bp) protein (492aa)
hypothetical protein AtheD1_09449 id=2161230 bin=GWE2_Bacteroidetes_29_8 species=unknown genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
gldK; gliding motility protein GldK Tax=GWE2_Bacteroidetes_29_8_curated
hypothetical protein
ar11r2_scaffold_333_9
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

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comp(11787..12800)
DNA (1014bp) protein (338aa)
Bacteroidetes-specific putative membrane protein id=2191586 bin=GWE2_Bacteroidetes_42_42 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
Bacteroidetes-specific putative membrane protein Tax=GWF2_Bacteroidetes_43_63_curated
Bacteroidetes-specific putative membrane protein
ar11r2_scaffold_333_10
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13118..16585)
DNA (3468bp) protein (1156aa)
hypothetical protein Tax=GWA2_Bacteroidetes_31_9_curated
Putative uncharacterized protein id=3845666 bin=GWF2_Bacteroidetes_38_335 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
ar11r2_scaffold_333_11
unknown

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16663..18684
DNA (2022bp) protein (674aa)

This feature has no annotations

ar11r2_scaffold_333_12
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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18692..19630
DNA (939bp) protein (313aa)
Group 2 glycosyl transferase id=3981921 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
family glycosyltransferase Tax=GWF2_Bacteroidetes_33_38_curated
family 2 glycosyl transferase
ar11r2_scaffold_333_13
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

19802..21838
DNA (2037bp) protein (679aa)
gliding motility-like protein (EC:3.2.1.-) Tax=GWF2_Bacteroidetes_43_63_curated
pkd domain containing protein
CHU large protein id=3773261 bin=GWF2_Bacteroidetes_43_63 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
ar11r2_scaffold_333_14
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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21853..22830
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ISD9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01884.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BA
peptidase, M28 family
ar11r2_scaffold_333_15
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

22830..24083
DNA (1254bp) protein (418aa)
aspartate kinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4] Tax=CG_Bacteroid_01
Aspartokinase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KW62_SOLCM
aspartate kinase
ar11r2_scaffold_333_16
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24238..24900)
DNA (663bp) protein (221aa)
Phosphoglycolate phosphatase, bacterial n=7 Tax=Bacteroides RepID=I8VGJ4_9BACE
phosphoglycolate phosphatase
Phosphoglycolate phosphatase, bacterial {ECO:0000313|EMBL:EIY25500.1}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dor
ar11r2_scaffold_333_17
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(24902..25444)
DNA (543bp) protein (181aa)
dTDP-4-dehydrorhamnose 3,5-epimerase id=4121448 bin=GWF2_Bacteroidetes_41_31 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
dTDP-4-dehydrorhamnose 3,5-epimerase Tax=GWF2_Bacteroidetes_41_31_curated
dTDP-4-dehydrorhamnose 3,5-epimerase
ar11r2_scaffold_333_18
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25449..27389)
DNA (1941bp) protein (647aa)
OmpA/MotB domain-containing protein Tax=GWA2_Bacteroidetes_31_9_curated
OmpA/MotB domain protein id=4544149 bin=GWF2_Bacteroidetes_35_48 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
OmpA/MotB domain-containing protein
ar11r2_scaffold_333_19
unknown

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comp(27999..28112)
DNA (114bp) protein (38aa)

This feature has no annotations

ar11r2_scaffold_333_20
unknown

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comp(28118..28486)
DNA (369bp) protein (123aa)

This feature has no annotations

ar11r2_scaffold_333_21
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28495..29391)
DNA (897bp) protein (299aa)
RHS repeat-associated core domain protein (Fragment) n=1 Tax=Prevotella amnii CRIS 21A-A RepID=E1GV98_9BACT
RHS repeat-associated core domain-containing protein
Tax=BJP_08E140C01_Bacteriodales_41_10
Displaying 21 items

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