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ar11r2_scaffold_371

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar11r2_scaffold_371_1
bacterium UASB14, Bacteria

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1..2403
DNA (2403bp) protein (801aa)
PEGA domain protein {ECO:0000313|EMBL:GAK51735.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
S-layer domain protein id=1724325 bin=GWB2_Nitrospirae_rel_47_37 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
sulfatase-modifying factor protein
ar11r2_scaffold_371_2
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2776..3402
DNA (627bp) protein (209aa)
orotate phosphoribosyltransferase n=1 Tax=Flavobacteriaceae bacterium S85 RepID=UPI000255A4E7
orotate phosphoribosyltransferase
Tax=BJP_08E140C01_Flavobacteriales_35_8
ar11r2_scaffold_371_trna_1
unknown

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3526..3600
DNA (75bp)
transferRNA
ar11r2_scaffold_371_3
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3775..7773
DNA (3999bp) protein (1333aa)
methyl-accepting chemotaxis sensory transducer Tax=GWA2_Bacteroidetes_30_7_curated
Methyl-accepting chemotaxis sensory transducer id=4519077 bin=GWF2_Bacteroidetes_35_48 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
methyl-accepting chemotaxis sensory transducer
ar11r2_scaffold_371_4
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7857..9182
DNA (1326bp) protein (442aa)
signal recognition particle n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037DF5A6
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales;
signal recognition particle subunit FFH/SRP54 (srp54)
ar11r2_scaffold_371_5
Geminocystis sp. NIES-3708, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(9413..10429)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9W0N9_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:BAQ60354.1}; TaxID=1615909 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIES-3708.;"
hypothetical protein
ar11r2_scaffold_371_6
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(10462..12372)
DNA (1911bp) protein (637aa)
Autoinducer 2 sensor kinase/phosphatase luxQ n=1 Tax=Bacteroidales bacterium CF RepID=U5Q5E7_9BACT
hypothetical protein
hypothetical protein Tax=GWA2_Bacteroidetes_31_9b_curated
ar11r2_scaffold_371_7
bacterium UASB14, Bacteria

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comp(12379..12813)
DNA (435bp) protein (145aa)
Response regulator receiver protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVI9_9BACT
Response regulator receiver protein {ECO:0000313|EMBL:GAK52465.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
rcp1; response regulator
ar11r2_scaffold_371_8
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(12824..15643)
DNA (2820bp) protein (940aa)
Sensory box histidine kinase id=1924047 bin=GWE2_RBX1_39_32 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
multi-sensor signal transduction histidine kinase
Tax=BJP_IG2157_Anaerolineales_55_23
ar11r2_scaffold_371_9
Vibrio harveyi, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15667..17160)
DNA (1494bp) protein (498aa)
cytochrome C oxidase subunit II n=1 Tax=Vibrio harveyi RepID=UPI00037D3B26
Alpha-amylase {ECO:0000313|EMBL:EMR37589.1}; TaxID=1125980 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio harveyi CAIM 1792.;"
cytoplasmic alpha-amylase
ar11r2_scaffold_371_10
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

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17226..17816
DNA (591bp) protein (197aa)
ThiJ/PfpI domain protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FFC8_DESAA
ThiJ/PfpI domain-containing protein; K03152 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis Tax=RBG_16_RIF03_38_10_curated
ThiJ/PfpI domain-containing protein
ar11r2_scaffold_371_11
unknown

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comp(18011..18562)
DNA (552bp) protein (184aa)

This feature has no annotations

ar11r2_scaffold_371_12
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18605..21694)
DNA (3090bp) protein (1030aa)
infB; Translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;"
Translation initiation factor IF-2 id=1746977 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
ar11r2_scaffold_371_13
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21754..22983)
DNA (1230bp) protein (410aa)
NusA antitermination factor; K02600 N utilization substance protein A Tax=GWB2_Bacteroidetes_41_8_curated
transcription elongation factor NusA id=3211888 bin=GWC2_Bacteroidetes_33_15 species=unknown genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_33_15 organism_group=Bacteroidetes organism_desc=Good +
transcription elongation factor NusA
ar11r2_scaffold_371_14
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23003..23425)
DNA (423bp) protein (141aa)
Ribosome maturation factor RimP n=1 Tax=Prevotella oulorum F0390 RepID=G1WCQ5_9BACT
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconiba
hypothetical protein
ar11r2_scaffold_371_15
Nonlabens ulvanivorans, Nonlabens, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23539..24297)
DNA (759bp) protein (253aa)
lpxH; UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C3K3_9FLAO
UDP-2,3-diacylglucosamine hydrolase {ECO:0000313|EMBL:GAK75001.1}; TaxID=906888 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Nonlabens.;" source="Nonlabens ul
ar11r2_scaffold_371_16
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24600..25112)
DNA (513bp) protein (171aa)
RHS repeat-associated core domain-containing protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9HEB9_BACT4
RHS repeat-associated core domain-containing protein {ECO:0000313|EMBL:EOS02367.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="B
RHS repeat-associated core domain-containing protein
Displaying 17 items

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