ggKbase home page

ar11r2_scaffold_79

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar11r2_scaffold_79_1
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2..499)
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Rhodospirillum rubrum F11 RepID=G2TCL9_RHORU
hypothetical protein
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:EMI55090.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.
ar11r2_scaffold_79_2
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(572..832)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D917BB
NAD-dependent DNA ligase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar11r2_scaffold_79_3
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1233..2354
DNA (1122bp) protein (374aa)
addiction module protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002DF2171
Addiction module protein {ECO:0000313|EMBL:KGM39536.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
hypothetical protein
ar11r2_scaffold_79_4
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2442..2864)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5C7M9_9GAMM
Choline dehydrogenase {ECO:0000313|EMBL:KDR44220.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.
hypothetical protein
ar11r2_scaffold_79_5
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2913..3368)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KWC1_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX97024.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacil
ar11r2_scaffold_79_6
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3390..4808)
DNA (1419bp) protein (473aa)
Rubredoxin-type Fe(Cys)4 protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KWC3_HALNC
rubredoxin-type Fe(Cys)4 protein rbh
Rubredoxin-type Fe(Cys)4 protein {ECO:0000313|EMBL:ACX97026.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halo
ar11r2_scaffold_79_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4988..6124)
DNA (1137bp) protein (379aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KWC4_HALNC
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ACX97027.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source=
ar11r2_scaffold_79_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6183..6746)
DNA (564bp) protein (188aa)
OsmC family protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KWC5_HALNC
OsmC family protein
OsmC family protein {ECO:0000313|EMBL:ACX97028.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus
ar11r2_scaffold_79_9
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7094..7537
DNA (444bp) protein (148aa)
cyanate lyase (EC:4.2.1.104)
Cyanate hydratase {ECO:0000256|HAMAP-Rule:MF_00535}; Short=Cyanase {ECO:0000256|HAMAP-Rule:MF_00535};; EC=4.2.1.104 {ECO:0000256|HAMAP-Rule:MF_00535};; Cyanate hydrolase {ECO:0000256|HAMAP-Rule:MF_005
Cyanate hydratase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KWC8_HALNC
ar11r2_scaffold_79_10
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7609..7923)
DNA (315bp) protein (105aa)
cytochrome C n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003694E79
cytochrome c, class I
Cytochrome c, class I {ECO:0000313|EMBL:ACL73954.1}; Flags: Precursor;; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" s
ar11r2_scaffold_79_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8282..9259
DNA (978bp) protein (326aa)
C4-dicarboxylate transporter/malic acid transport protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXB1_HALNC
C4-dicarboxylate transporter/malic acid transport protein
C4-dicarboxylate transporter/malic acid transport protein {ECO:0000313|EMBL:ACX95125.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothi
ar11r2_scaffold_79_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9340..9726
DNA (387bp) protein (129aa)
Invasion gene expression up-regulator SirB n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXB0_HALNC
invasion gene expression up-regulator SirB
Invasion gene expression up-regulator SirB {ECO:0000313|EMBL:ACX95124.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" so
ar11r2_scaffold_79_13
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9740..10888
DNA (1149bp) protein (383aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X3U8_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG29674.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiob
ar11r2_scaffold_79_14
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10885..11658
DNA (774bp) protein (258aa)
ABC transporter related protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X3U7_THIK1
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADG29673.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12
ar11r2_scaffold_79_15

Not on your lists

11662..12606
DNA (945bp) protein (315aa)
ABC transport system periplasmic substrate binding protein n=1 Tax=uncultured organism RepID=M1Q0H5_9ZZZZ
ABC transport system periplasmic substrate binding protein {ECO:0000313|EMBL:AGF87146.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
ABC transport system periplasmic substrate binding protein
ar11r2_scaffold_79_16
CG_Gallio_02, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12637..13293
DNA (657bp) protein (219aa)
hypothetical protein Tax=CG_Gallio_02
Uncharacterized protein id=1914896 bin=GWE2_Gallionellales_58_10 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
ABC-type uncharacterized transport system, auxiliary component
ar11r2_scaffold_79_17
unknown

Not on your lists

13310..13801
DNA (492bp) protein (164aa)

This feature has no annotations

ar11r2_scaffold_79_18
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13798..15852
DNA (2055bp) protein (685aa)
Glucosyltransferase MdoH n=1 Tax=Desulfovibrio sp. X2 RepID=S7V3H7_9DELT
Glucosyltransferase MdoH {ECO:0000313|EMBL:EPR41074.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovi
glucosyltransferase MdoH
ar11r2_scaffold_79_19
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15849..17636
DNA (1788bp) protein (596aa)
Putative sulfate permease n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MN06_PSEPS
Putative sulfate permease {ECO:0000313|EMBL:ELS29277.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/ps
putative SulP family transporter
ar11r2_scaffold_79_20
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17638..18150
DNA (513bp) protein (171aa)
Putative phosphohistidine phosphatase, SixA n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7E2_ANADF
putative phosphohistidine phosphatase SixA
Putative phosphohistidine phosphatase, SixA {ECO:0000313|EMBL:ABS24638.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; A
ar11r2_scaffold_79_21
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18682..20178
DNA (1497bp) protein (499aa)
Ppx/GppA phosphatase {ECO:0000313|EMBL:EGV19509.1}; EC=3.6.1.40 {ECO:0000313|EMBL:EGV19509.1};; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioca
Ppx/GppA phosphatase n=1 Tax=Thiocapsa marina 5811 RepID=F9U897_9GAMM
exopolyphosphatase
ar11r2_scaffold_79_22
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20275..22377)
DNA (2103bp) protein (701aa)
polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
Polyphosphate kinase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXB5_HALNC
ar11r2_scaffold_79_23
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22553..23260
DNA (708bp) protein (236aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JWC5_9GAMM
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=391615 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HTCC501
phosphate uptake regulator PhoU
ar11r2_scaffold_79_24
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23462..24340)
DNA (879bp) protein (293aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
Phosphate ABC transporter, ATPase subunit n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1P4_HALNC
phosphate ABC transporter ATPase
ar11r2_scaffold_79_25
Marinobacter santoriniensis, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24367..25206)
DNA (840bp) protein (280aa)
Phosphate ABC transporter inner membrane subunit PstA n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7CMY4_9ALTE
Phosphate ABC transporter inner membrane subunit PstA {ECO:0000313|EMBL:EMP54991.1}; TaxID=1288826 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobact
phosphate ABC transporter permease
ar11r2_scaffold_79_26
Marinobacter santoriniensis, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25219..26229)
DNA (1011bp) protein (337aa)
Phosphate ABC transporter inner membrane subunit PstC n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7DBG0_9ALTE
Phosphate ABC transporter inner membrane subunit PstC {ECO:0000313|EMBL:EMP54992.1}; TaxID=1288826 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobact
phosphate ABC transporter inner membrane subunit PstC
ar11r2_scaffold_79_27
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26340..27383)
DNA (1044bp) protein (348aa)
Phosphate-binding protein PstS n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5CVW2_STEMA
phoX; phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomo
ar11r2_scaffold_79_28
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27713..29206
DNA (1494bp) protein (498aa)
polyphosphate-dependent AMP kinase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003823C80
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL71583.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkali
ar11r2_scaffold_79_29
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29470..31770)
DNA (2301bp) protein (767aa)
PTSINtr with GAF domain, PtsP n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZF6_HALNC
protein PtsP
PTSINtr with GAF domain, PtsP {ECO:0000313|EMBL:ACX95829.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothi
ar11r2_scaffold_79_30
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31767..32300)
DNA (534bp) protein (178aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hy
RNA pyrophosphohydrolase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G116_9GAMM
RNA pyrophosphohydrolase
Displaying items 1-30 of 92 in total

View Taxonomy