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ar11r2_scaffold_150

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar11r2_scaffold_150_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..733
DNA (732bp) protein (244aa)
Sulfate transporter n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BZW1_9GAMM
sulfate transporter
Sulfate transporter {ECO:0000313|EMBL:EIJ36904.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix
ar11r2_scaffold_150_2
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

941..1495
DNA (555bp) protein (185aa)
LemA family protein n=1 Tax=Thiocapsa marina 5811 RepID=F9U802_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AKH21868.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
LemA family protein
ar11r2_scaffold_150_3
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1492..2730
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000361EA0C
Uncharacterized protein {ECO:0000313|EMBL:KKB07126.1}; Flags: Fragment;; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
ar11r2_scaffold_150_4
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2915..3217)
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KWU3_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX97063.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacil
ar11r2_scaffold_150_5
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3472..5763)
DNA (2292bp) protein (764aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035EC13B
UPF0313 protein ygiQ {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Conten
radical SAM protein rbh
ar11r2_scaffold_150_6
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5876..7759)
DNA (1884bp) protein (628aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacill
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXS5_HALNC
PpiC-type peptidyl-prolyl cis-trans isomerase
ar11r2_scaffold_150_7
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7851..8126)
DNA (276bp) protein (92aa)
Histone family protein DNA-binding protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GNU1_THISH
histone family protein DNA-binding protein
Histone family protein DNA-binding protein {ECO:0000313|EMBL:ACL72030.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;"
ar11r2_scaffold_150_8
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8294..10723)
DNA (2430bp) protein (810aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
peptidase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037FA8C5
DNA-binding protein
ar11r2_scaffold_150_9
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10891..12171)
DNA (1281bp) protein (427aa)
ATP-dependent protease n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000364A172
Clp protease ATP-binding protein
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales
ar11r2_scaffold_150_10
Pseudomonas sp. M47T1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12574..13209)
DNA (636bp) protein (212aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Pseudomonas sp. M47T1 RepID=I4MY43_9PSED
ATP-dependent Clp protease, proteolytic subunitclpp
ar11r2_scaffold_150_11
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13240..14535)
DNA (1296bp) protein (432aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
trigger factor n=1 Tax=Salinimonas chungwhensis RepID=UPI000373628A
trigger factor
ar11r2_scaffold_150_trna_1
unknown

Not on your lists

comp(14780..14860)
DNA (81bp)
transferRNA
ar11r2_scaffold_150_12
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15031..15978
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=beta proteobacterium L13 RepID=UPI000369F3A8
ATPase AAA {ECO:0000313|EMBL:GAO37540.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
methanol dehydrogenase regulatory protein MoxR
ar11r2_scaffold_150_13
unknown

Not on your lists

15975..16835
DNA (861bp) protein (287aa)

This feature has no annotations

ar11r2_scaffold_150_14
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16832..18853
DNA (2022bp) protein (674aa)
Transglutaminase-like enzyme, predicted cysteine protease n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHZ1_AZOSU
transglutaminase
Transglutaminase-like enzyme, predicted cysteine protease {ECO:0000313|EMBL:AEV26345.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocycl
ar11r2_scaffold_150_15
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19180..19911
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9E7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF00628.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkal
ar11r2_scaffold_150_16
Halomonas sp. PBN3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19916..21184)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Halomonas sp. PBN3 RepID=U7NSN5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERS86287.1}; TaxID=1397528 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. PBN3.
hypothetical protein
ar11r2_scaffold_150_17
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21510..22991
DNA (1482bp) protein (494aa)
Conserved domain protein n=3 Tax=Acidithiobacillus RepID=B7JBE8_ACIF2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACH85053.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acid
ar11r2_scaffold_150_18
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23476..24471
DNA (996bp) protein (332aa)
sodium:calcium antiporter n=1 Tax=Marinobacterium stanieri RepID=UPI000255808A
Ca2+/Na+ antiporter
Sodium:calcium antiporter {ECO:0000313|EMBL:ERS10793.1}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax s
ar11r2_scaffold_150_19
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24527..26479)
DNA (1953bp) protein (651aa)
ABC transporter related protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY99_HALNC
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACX95422.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halot
ar11r2_scaffold_150_20
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26625..26930)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCD8_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB73583.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
ar11r2_scaffold_150_21
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26935..28212)
DNA (1278bp) protein (426aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
Serine--tRNA ligase n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0H0B8_9GAMM
seryl-tRNA synthetase
ar11r2_scaffold_150_22
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28232..28711)
DNA (480bp) protein (160aa)
Transcription elongation factor GreA n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L118_HALNC
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=555778 species="Bacteria
ar11r2_scaffold_150_23
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28722..31964)
DNA (3243bp) protein (1081aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria;
Carbamoyl-phosphate synthase large chain n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L119_HALNC
carbamoyl-phosphate synthase large subunit
ar11r2_scaffold_150_24
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32074..33231)
DNA (1158bp) protein (386aa)
Carbamoyl-phosphate synthase small chain {ECO:0000255|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000255|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000255|HAMAP-Rule:MF_012
carbamoyl phosphate synthase small subunit n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036495A4
carbamoyl-phosphate synthase small subunit
ar11r2_scaffold_150_25
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33372..34175)
DNA (804bp) protein (268aa)
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000255|HAMAP-Rule:MF_00102}; Short=HTPA reductase {ECO:0000255|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000255|HAMAP-Rule:MF_00102};; TaxID=292415 spec
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=DAPB_THIDA
ar11r2_scaffold_150_26
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34569..36941)
DNA (2373bp) protein (791aa)
Penicillin-binding protein, 1A family n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L235_HALNC
penicillin-binding protein
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ACX96758.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source=
ar11r2_scaffold_150_27
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37087..38160
DNA (1074bp) protein (358aa)
fimbrial assembly protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003684292
type IV pilus assembly protein PilM
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:ACL74093.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source
ar11r2_scaffold_150_28
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38160..38786
DNA (627bp) protein (209aa)
Fimbrial assembly family protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L237_HALNC
fimbrial assembly family protein
Fimbrial assembly family protein {ECO:0000313|EMBL:ACX96760.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halo
ar11r2_scaffold_150_29
Pseudomonas sp. BAY1663, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38783..39427
DNA (645bp) protein (215aa)
Type 4 fimbrial biogenesis protein PilO n=1 Tax=Pseudomonas stutzeri (strain A1501) RepID=A4VH10_PSEU5
Type 4 fimbrial biogenesis protein PilO {ECO:0000313|EMBL:EXF46937.1}; TaxID=1439940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="P
pilO; type 4 fimbrial biogenesis protein PilO
Displaying items 1-30 of 38 in total

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