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ar11r2_scaffold_418

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar11r2_scaffold_418_1

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comp(109..2475)
DNA (2367bp) protein (789aa)
von Willebrand factor A n=1 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=UPI000366845B
CbbO protein/von Willebrand factor type A domain protein {ECO:0000313|EMBL:AAR37636.1}; TaxID=257389 species="Bacteria; environmental samples.;" source="uncultured marine bacterium 439.;"
nitric oxide reductase activation protein
ar11r2_scaffold_418_2
Methylophaga nitratireducenticrescens, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2855..3661)
DNA (807bp) protein (269aa)
ATPase AAA n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003753346
Rubisco activation protein CbbQ
Methylophaga nitratireducenticrescens strain JAM1, complete genome {ECO:0000313|EMBL:AFI83370.1}; TaxID=754476 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiacea
ar11r2_scaffold_418_3

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comp(3818..4174)
DNA (357bp) protein (119aa)
Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (RubisCO) {ECO:0000313|EMBL:CBI11556.1}; EC=4.1.1.39 {ECO:0000313|EMBL:CBI11556.1};; TaxID=410659 species="unclassified sequences; metagen
Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (RubisCO) n=1 Tax=mine drainage metagenome RepID=E6QWD3_9ZZZZ
ribulose bisphosphate carboxylase small chain
ar11r2_scaffold_418_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4241..5659)
DNA (1419bp) protein (473aa)
cbbL; ribulose bisophosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] id=5082205 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
cbbL; ribulose bisophosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] Tax=GWE1_Burkholderiales_65_30_curated
cbbL; ribulose bisophosphate carboxylase (EC:4.1.1.39)
ar11r2_scaffold_418_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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5884..6795
DNA (912bp) protein (304aa)
Transcriptional regulator, LysR family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB77_NITMU
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABB73994.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="N
ar11r2_scaffold_418_6
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6906..7406)
DNA (501bp) protein (167aa)
Single-stranded DNA-binding protein n=1 Tax=gamma proteobacterium BDW918 RepID=I2JLX2_9GAMM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1168065 species="Bacteria; Proteobacteria; Gam
single-stranded DNA-binding protein
ar11r2_scaffold_418_7
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

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7511..10351
DNA (2841bp) protein (947aa)
UvrABC system protein A n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BA23_9GAMM
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit A
ar11r2_scaffold_418_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10403..11461
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000361B766
Uncharacterized protein {ECO:0000313|EMBL:EKE76443.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum
heat shock protein
ar11r2_scaffold_418_9
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11580..13184)
DNA (1605bp) protein (535aa)
NAD+ synthetase n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YE12_THIV6
NAD+ synthetase Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
NAD+ synthetase
ar11r2_scaffold_418_10
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13181..14071)
DNA (891bp) protein (297aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GN40_THISH
succinyl-CoA synthetase subunit alpha
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar11r2_scaffold_418_11
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14073..15242)
DNA (1170bp) protein (390aa)
succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RTC9_ALLVD
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar11r2_scaffold_418_12
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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15481..17103
DNA (1623bp) protein (541aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitros
ATP-binding region ATPase domain protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BWD1_NITHN
ATP-binding region ATPase domain-containing protein
ar11r2_scaffold_418_13
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17100..17888
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDG7_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM33976.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (str
ar11r2_scaffold_418_14
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

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17885..19231
DNA (1347bp) protein (449aa)
Type 4 fimbriae expression regulatory protein PilR n=2 Tax=sulfur-oxidizing symbionts RepID=G2FEH6_9GAMM
Type IV fimbriae expression regulatory protein pilR {ECO:0000313|EMBL:EGV51760.1}; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbi
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
ar11r2_scaffold_418_15
Pelodictyon phaeoclathratiforme, Pelodictyon, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(19454..19843)
DNA (390bp) protein (130aa)
PilT protein domain protein n=1 Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=B4SB09_PELPB
PilT protein domain-containing protein
PilT protein domain protein {ECO:0000313|EMBL:ACF43955.1}; TaxID=324925 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Pelodictyon.;" source="Pelodi
ar11r2_scaffold_418_16
Chlorobium ferrooxidans, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(19840..20067)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YSW0_9CHLB
Uncharacterized protein {ECO:0000313|EMBL:EAT59512.1}; TaxID=377431 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium
hypothetical protein
ar11r2_scaffold_418_17
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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20346..20693
DNA (348bp) protein (116aa)
Phage protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IXF1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDW96098.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein
ar11r2_scaffold_418_18
unknown

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comp(20671..20760)
DNA (90bp) protein (30aa)

This feature has no annotations

ar11r2_scaffold_418_19
Acinetobacter tjernbergiae, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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20906..21442
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Acinetobacter tjernbergiae DSM 14971 = CIP 107465 RepID=V2V0J0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESK54381.1}; TaxID=1120928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter tjer
pilus assembly protein
ar11r2_scaffold_418_20
Acinetobacter haemolyticus, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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21720..22460
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Acinetobacter haemolyticus ATCC 19194 RepID=D4XU74_ACIHA
Uncharacterized protein {ECO:0000313|EMBL:EFF81282.1}; TaxID=707232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter haemo
type IV pilin accessory protein
ar11r2_scaffold_418_21
unknown

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comp(22365..22610)
DNA (246bp) protein (82aa)

This feature has no annotations

Displaying 21 items

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