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ALUMROCK_MS11_Chromatiales_related_55_29

ALUMROCK_MS11_Gammaproteobacteria_55_29
In projects: ALUMROCK_MS11  |  alumrock-genomes

Consensus taxonomy: Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: AlumRock_MS11_UNK Curated version: ALUMROCK_MS11_Chromatiales_related_55_29_curated

Properties

Avg. coverage: 28.76 Longest contig: 30.71 Kbp Bin length: 1.54 Mbp GC content: 55.27 %
Contigs count: 453 Features count: 1909 rRNAs count: 0 tRNAs count: 16

Genome completeness

near complete RP 49 / 55 MC: 1 BSCG 48 / 51 MC: 1 ASCG 10 / 38 MC: 1

Description

Final. ESOM area with Gamma, but distinct coverage. Some Beta-like contigs but there is no Beta bin.

Displaying items 351-400 of 453 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
ar11r2_scaffold_22562
Species: endosymbiont of Riftia pachyptila (50%)
2 1610 bp 53.04 23.66 99.32
ar11r2_scaffold_20304
Species: Halothiobacillus neapolitanus (50%)
2 1719 bp 55.26 39.44 98.60
ar11r2_scaffold_31643
Species: Alkalilimnicola ehrlichii (50%)
2 1299 bp 59.35 28.52 100.23
ar11r2_scaffold_20309
Species: Thiocapsa marina (50%)
2 1719 bp 56.54 37.43 97.91
ar11r2_scaffold_14431
Species: endosymbiont of unidentified scaly snail isolate Monju (50%)
2 2102 bp 57.18 29.12 83.63
ar11r2_scaffold_8051
Species: Halothiobacillus neapolitanus (50%)
2 2944 bp 55.54 29.50 97.01
ar11r2_scaffold_17294
Species: Halothiobacillus neapolitanus (50%)
2 1894 bp 52.96 32.95 79.20
ar11r2_scaffold_39042
Species: Halothiobacillus neapolitanus (100%)
2 2019 bp 53.19 35.51 90.34
ar11r2_scaffold_36812
Species: Candidatus Contendobacter odensis (50%)
2 1173 bp 61.30 27.62 100.26
ar11r2_scaffold_31163
Species: BJP_IG2103_SUB10_Xanthomonadales_61_45 (50%)
2 1311 bp 56.14 24.94 100.23
ar11r2_scaffold_37398
Species: Halothiobacillus neapolitanus (100%)
2 1160 bp 54.66 32.59 93.10
ar11r2_scaffold_42214
Species: gamma proteobacterium HTCC5015 (50%)
2 1068 bp 54.87 34.55 85.11
ar11r2_scaffold_42470
Species: Halothiobacillus neapolitanus (50%)
2 1063 bp 52.30 22.58 87.77
ar11r2_scaffold_17833
Species: RBG_16_Gammaproteobacteria_57_12_curated (50%)
2 3122 bp 55.93 30.89 55.54
ar11r2_scaffold_34378
Species: marine gamma proteobacterium HTCC2148 (50%)
2 1228 bp 52.85 26.75 74.02
ar11r2_scaffold_61373
Species: Halothiobacillus neapolitanus (50%)
2 1185 bp 50.55 38.10 80.00
ar11r2_scaffold_23914
Species: Thiolapillus brandeum (50%)
2 2872 bp 57.21 27.94 88.06
ar11r2_scaffold_27859
Species: Halothiobacillus neapolitanus (100%)
2 1410 bp 58.09 33.94 80.64
ar11r2_scaffold_25813
Species: Thioalkalivibrio sulfidiphilus (50%)
2 1482 bp 53.78 40.08 92.51
ar11r2_scaffold_8610
Species: mine drainage metagenome (50%)
2 3943 bp 60.13 34.47 90.31
ar11r2_scaffold_12525
Species: Candidatus Competibacter denitrificans (50%)
2 2281 bp 63.22 28.54 100.09
ar11r2_scaffold_43381
Species: Thioalkalivibrio sulfidiphilus (50%)
2 1048 bp 61.26 40.79 99.90
ar11r2_scaffold_9202
Species: CG_Anaero_02 (50%)
2 2731 bp 63.82 24.39 93.81
ar11r2_scaffold_17347
Species: marine gamma proteobacterium HTCC2148 (50%)
2 1890 bp 58.89 32.62 99.68
ar11r2_scaffold_41917
Species: BJP_08E140C01_Xanthomonadales_64_42 (50%)
2 1073 bp 54.80 26.70 96.46
ar11r2_scaffold_7764
Species: RLO_Pseudomonas_59_9 (50%)
2 3010 bp 55.02 26.61 93.19
ar11r2_scaffold_18956
Species: Nitrosococcus halophilus (50%)
2 1792 bp 61.77 32.98 98.60
ar11r2_scaffold_21990
Species: Halothiobacillus neapolitanus (50%)
2 1635 bp 55.60 23.58 90.64
ar11r2_scaffold_29943
Species: RBG_13_Deltaproteobacteria_49_15_curated (50%)
2 1348 bp 63.65 23.26 100.15
ar11r2_scaffold_13073
Species: Halothiobacillus neapolitanus (50%)
2 2225 bp 55.96 28.04 98.29
ar11r2_scaffold_28419
Species: CG_Mariprof_03 (50%)
2 1393 bp 57.50 28.32 64.82
ar11r2_scaffold_8886
Species: Halothiobacillus neapolitanus (50%)
2 4123 bp 55.13 38.86 43.08
ar11r2_scaffold_29696
Species: Thioflavicoccus mobilis (50%)
2 1355 bp 59.85 40.30 100.30
ar11r2_scaffold_45794
Species: Ectothiorhodospira sp. PHS-1 (50%)
2 1010 bp 53.47 27.33 97.13
ar11r2_scaffold_63466
Species: Thioalkalivibrio thiocyanoxidans (50%)
2 1420 bp 58.31 23.98 100.14
ar11r2_scaffold_24762
Species: Halothiobacillus neapolitanus (50%)
2 1520 bp 57.50 28.32 98.29
ar11r2_scaffold_22667
Species: Halothiobacillus neapolitanus (100%)
2 1605 bp 49.97 23.74 84.30
ar11r2_scaffold_21254
Species: Halothiobacillus neapolitanus (100%)
2 1671 bp 54.82 27.83 88.69
ar11r2_scaffold_38861
Species: endosymbiont of unidentified scaly snail isolate Monju (50%)
2 1131 bp 54.29 24.93 95.23
ar11r2_scaffold_20918
Species: Thiorhodococcus sp. AK35 (50%)
2 1686 bp 57.71 25.71 80.78
ar11r2_scaffold_36630
Species: Thiorhodovibrio sp. 970 (50%)
2 1176 bp 54.59 33.67 92.60
ar11r2_scaffold_13104
Species: CG_Thiomicrospira_01 (50%)
2 2222 bp 60.40 25.38 91.67
ar11r2_scaffold_30809
Species: gamma proteobacterium NOR5-3 (50%)
2 1322 bp 54.16 26.66 80.56
ar11r2_scaffold_28451
Species: Thioalkalivibrio sp. K90mix (50%)
2 1392 bp 61.21 37.61 100.65
ar11r2_scaffold_36892
Species: endosymbiont of unidentified scaly snail isolate Monju (50%)
2 1171 bp 55.17 23.95 98.89
ar11r2_scaffold_36386
Species: endosymbiont of Riftia pachyptila (50%)
2 1676 bp 62.29 25.06 103.64
ar11r2_scaffold_29734
Species: Ectothiorhodospira sp. PHS-1 (50%)
2 1354 bp 60.71 22.82 101.26
ar11r2_scaffold_35808
Species: Arenimonas donghaensis (50%)
2 1193 bp 53.23 41.24 63.37
ar11r2_scaffold_39904
Species: endosymbiont of Tevnia jerichonana (50%)
2 1111 bp 58.69 22.82 99.64
ar11r2_scaffold_16359
Species: Thiocapsa marina (50%)
2 1955 bp 49.77 46.96 77.95
Displaying items 351-400 of 453 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.