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ALUMROCK_MS11_Chromatiales_related_55_29

ALUMROCK_MS11_Gammaproteobacteria_55_29
In projects: ALUMROCK_MS11  |  alumrock-genomes

Consensus taxonomy: Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Final. ESOM area with Gamma, but distinct coverage. Some Beta-like contigs but there is no Beta bin.

Displaying items 401-450 of 453 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
ar11r2_scaffold_29224
Species: Halothiobacillus neapolitanus (50%)
2 1369 bp 56.25 33.86 92.48
ar11r2_scaffold_44350
Species: RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated (50%)
2 1032 bp 55.52 31.40 85.47
ar11r2_scaffold_24030
Species: RBG_16_Gammaproteobacteria_57_12_curated (50%)
2 1546 bp 57.24 34.15 90.23
ar11r2_scaffold_65566
Species: Oleiagrimonas soli (50%)
2 1318 bp 51.37 24.24 96.28
ar11r2_scaffold_8936
Species: BJP_IG2102_Gammaproteobacteria_62_140 (50%)
2 2774 bp 58.65 30.61 82.52
ar11r2_scaffold_39149
Species: endosymbiont of Riftia pachyptila (50%)
2 1126 bp 56.31 27.84 100.18
ar11r2_scaffold_25382
Species: Halothiobacillus neapolitanus (50%)
2 1497 bp 56.31 27.86 96.39
ar11r2_scaffold_31518
Species: Ectothiorhodospira sp. PHS-1 (50%)
2 1302 bp 54.84 35.94 98.62
ar11r2_scaffold_36921
Species: Thioalkalivibrio sulfidiphilus (50%)
2 1170 bp 53.59 24.36 84.87
ar11r2_scaffold_4207
Species: Candidatus Accumulibacter sp. SK-12 (50%)
2 4290 bp 56.81 30.00 93.01
ar11r2_scaffold_14572
Species: Halothiobacillus neapolitanus (50%)
2 2807 bp 59.78 29.93 93.73
ar11r2_scaffold_45862
Species: Thioalkalivibrio sulfidiphilus (50%)
2 1009 bp 53.32 27.80 71.06
ar11r2_scaffold_13920
Species: Thioalkalivibrio thiocyanoxidans (50%)
2 2144 bp 56.44 34.07 94.87
ar11r2_scaffold_32678
Species: Thioflavicoccus mobilis (50%)
2 1272 bp 54.01 32.08 93.87
ar11r2_scaffold_14072
Species: CG_Mariprof_04 (50%)
2 2129 bp 56.32 24.66 94.55
ar11r2_scaffold_40016
Species: Solemya velum gill symbiont (50%)
2 1109 bp 58.97 47.07 98.20
ar11r2_scaffold_28508
Species: Halothiobacillus neapolitanus (50%)
2 1391 bp 57.44 39.14 99.21
ar11r2_scaffold_22733
Species: Halothiobacillus neapolitanus (100%)
2 2497 bp 55.67 29.13 99.96
ar11r2_scaffold_23777
Species: Thiolapillus brandeum (100%)
1 1556 bp 56.11 24.00 99.87
ar11r2_scaffold_36957
Species: Thioalkalivibrio sulfidiphilus (100%)
1 1170 bp 55.30 28.72 97.18
ar11r2_scaffold_31831
Species: Thioalkalivibrio sulfidiphilus (100%)
1 1294 bp 55.95 29.44 95.75
ar11r2_scaffold_16432
Species: BJP_IG2102_Gammaproteobacteria_62_140 (100%)
1 1952 bp 58.25 37.81 99.90
ar11r2_scaffold_13193
Species: BJP_IG2102_Gammaproteobacteria_62_140 (100%)
1 2214 bp 59.53 30.28 99.86
ar11r2_scaffold_18826
Species: Nitrosomonas communis (100%)
1 1800 bp 56.17 38.92 100.00
ar11r2_scaffold_43770
Species: Nitrosococcus halophilus (100%)
1 1041 bp 64.07 29.83 99.71
ar11r2_scaffold_8759
Species: Candidatus Contendobacter odensis (100%)
1 2809 bp 60.23 23.50 99.96
ar11r2_scaffold_20264
Species: Halothiobacillus neapolitanus (100%)
1 1721 bp 57.76 31.03 99.88
ar11r2_scaffold_31603
Species: Halothiobacillus neapolitanus (100%)
1 1300 bp 52.54 31.38 93.23
ar11r2_scaffold_20790
Species: Halothiobacillus neapolitanus (100%)
1 1693 bp 56.76 36.33 79.39
ar11r2_scaffold_35412
Species: RBG_16_Gammaproteobacteria_57_12_curated (100%)
1 1203 bp 55.78 30.17 100.00
ar11r2_scaffold_24659
Species: Thiolapillus brandeum (100%)
1 1524 bp 55.58 31.50 90.55
ar11r2_scaffold_10772
Species: Halothiobacillus neapolitanus (100%)
1 2901 bp 57.60 37.54 95.76
ar11r2_scaffold_45975
Species: Thioalkalivibrio sulfidiphilus (100%)
1 1007 bp 58.39 24.43 99.80
ar11r2_scaffold_45980
Species: CG_Beta_01 (100%)
1 1007 bp 55.51 23.24 84.31
ar11r2_scaffold_34347
Species: Solemya velum gill symbiont (100%)
1 1229 bp 58.18 23.92 99.84
ar11r2_scaffold_42703
Species: Nitrococcus mobilis (100%)
1 1059 bp 63.17 22.52 100.00
ar11r2_scaffold_41097
Species: Nitrosococcus halophilus (100%)
1 1089 bp 55.46 25.21 99.72
ar11r2_scaffold_13786
Species: Halothiobacillus neapolitanus (100%)
1 2158 bp 54.68 40.66 99.81
ar11r2_scaffold_12483
Species: Halothiobacillus neapolitanus (100%)
1 2285 bp 56.67 25.47 99.91
ar11r2_scaffold_25021
Species: Halothiobacillus neapolitanus (100%)
1 1510 bp 55.63 25.63 99.93
ar11r2_scaffold_22856
Species: Halothiobacillus neapolitanus (100%)
1 1597 bp 58.17 35.32 99.94
ar11r2_scaffold_42479
Species: BJP_IG2102_Gammaproteobacteria_62_140 (100%)
1 1063 bp 59.08 34.15 99.62
ar11r2_scaffold_20610
Species: BJP_IG2102_Gammaproteobacteria_62_140 (100%)
1 1703 bp 54.02 33.12 99.88
ar11r2_scaffold_61634
Species: Rheinheimera sp. A13L (100%)
1 1450 bp 58.34 41.38 66.62
ar11r2_scaffold_7235
Species: GWB2_Desulfobacterales_56_26_curated (100%)
1 3135 bp 58.47 26.03 87.46
ar11r2_scaffold_36078
Species: Halothiobacillus neapolitanus (100%)
1 1188 bp 53.87 35.10 93.69
ar11r2_scaffold_38063
Species: Halothiobacillus neapolitanus (100%)
1 1147 bp 61.20 43.42 99.91
ar11r2_scaffold_19213
Species: Ectothiorhodospira sp. PHS-1 (100%)
1 1776 bp 61.99 23.90 99.83
ar11r2_scaffold_25847
Species: Candidatus Contendobacter odensis (100%)
1 1481 bp 57.93 34.03 96.62
ar11r2_scaffold_11932
Species: RLO_PLX_64_10 (100%)
1 2345 bp 48.96 28.21 71.64
Displaying items 401-450 of 453 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.