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ar11r2_scaffold_2485

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar11r2_scaffold_2485_1
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(58..525)
DNA (468bp) protein (156aa)
transmembrane_regions id=717979 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
id=3737524 Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
ar11r2_scaffold_2485_2
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(645..1085)
DNA (441bp) protein (147aa)
RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=717978 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
RNA polymerase sigma factor RpoE
ar11r2_scaffold_2485_3
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1412..2551
DNA (1140bp) protein (380aa)
ial:IALB_0310 dxr; 1-Deoxy-D-xylulose 5-phosphate reductoisomerase; K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] id=717977 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
dxr; 1-Deoxy-D-xylulose 5-phosphate reductoisomerase
ar11r2_scaffold_2485_4
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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2720..3094
DNA (375bp) protein (125aa)
S23 ribosomal protein id=3771497 bin=GWF2_Ignavibacteria_35_20 species=Niabella soli genus=Niabella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
S23 ribosomal protein Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
intervening sequence, 23S rRNA
ar11r2_scaffold_2485_5
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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3217..4572
DNA (1356bp) protein (452aa)
ial:IALB_0309 rseP; Sigma E protease regulator; K11749 regulator of sigma E protease [EC:3.4.24.-] id=717975 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriace
rseP; Sigma E protease regulator
ar11r2_scaffold_2485_6
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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4569..4865
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-N05 RepID=UPI00035DBA8A
nucleotidyltransferase; K07075 Tax=RBG_16_Ignavibacteria_36_9_curated
nucleotidyltransferase
ar11r2_scaffold_2485_7
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

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4862..5227
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI00036CDBD3
nucleotidyltransferase Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
hypothetical protein
ar11r2_scaffold_2485_8
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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5380..5757
DNA (378bp) protein (126aa)
ial:IALB_0308 lytS; LytT sensor histidine kinase id=717974 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
lytS; LytT sensor histidine kinase
LytT sensor histidine kinase {ECO:0000313|EMBL:AFH48020.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibac
Displaying 8 items

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