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ar11r2_scaffold_407

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar11r2_scaffold_407_1
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..711
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C5R5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDN65869.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
ar11r2_scaffold_407_2
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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726..1499
DNA (774bp) protein (258aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EQ39_9BACE rbh
ar11r2_scaffold_407_3
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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1539..3440
DNA (1902bp) protein (634aa)
ATP-dependent DNA helicase recq id=2692900 bin=GWF2_Bacteroidetes_33_38 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
ATP-dependent DNA helicase RecQ
Tax=GWF2_Bacteroidetes_33_38_curated
ar11r2_scaffold_407_4
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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3448..3741
DNA (294bp) protein (98aa)
Putative uncharacterized protein id=4533292 bin=GWF2_Bacteroidetes_33_38 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein
Tax=GWF2_Bacteroidetes_33_38_curated
ar11r2_scaffold_407_5
Leptonema illini, Leptonema, Spirochaetia, Spirochaetes, Bacteria

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3742..4251
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Leptonema illini DSM 21528 RepID=H2CIA9_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:EHQ04882.1}; TaxID=929563 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptonema.;" source="Leptonema illini DSM 21528.;"
hypothetical protein
ar11r2_scaffold_407_6
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(4260..5237)
DNA (978bp) protein (326aa)
tRNA-dihydrouridine synthase id=2095586 bin=GWB2_Bacteroidetes_32_14 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47 rbh
tRNA-U20-dihydrouridine synthase rbh
Tax=GWA2_Bacteroidetes_31_9b_curated
ar11r2_scaffold_407_7
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(5231..5965)
DNA (735bp) protein (245aa)
Geranylgeranylglyceryl phosphate synthase id=3455008 bin=GWF2_Bacteroidetes_38_335 species=Niabella soli genus=Niabella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
geranylgeranylglyceryl phosphate synthase-like protein
Tax=GWF2_Bacteroidetes_38_335_curated
ar11r2_scaffold_407_8
unknown

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6153..6551
DNA (399bp) protein (133aa)

This feature has no annotations

ar11r2_scaffold_407_9
Helicobacter sp. MIT 03-1616, Helicobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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6566..7528
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:194 RepID=R5QMP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGL08996.1}; TaxID=1548148 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter.;" source="Helicobacter sp. MIT 03-1616.;"
ar11r2_scaffold_407_10
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7525..8217)
DNA (693bp) protein (231aa)
Methyltransferase FkbM family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1E7_DYAFD
Methyltransferase FkbM family {ECO:0000313|EMBL:KGE14392.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
FkbM family methyltransferase
ar11r2_scaffold_407_11
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(8223..9209)
DNA (987bp) protein (329aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZZW3_MELRP rbh
UDP-N-acetylenolpyruvoylglucosamine reductase rbh
ar11r2_scaffold_407_12
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9422..12817)
DNA (3396bp) protein (1132aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037A843B rbh
WD40 repeat protein {ECO:0000313|EMBL:ELR70726.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
wd40 repeat, subgroup
ar11r2_scaffold_407_13
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13242..14180)
DNA (939bp) protein (313aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
purC; Phosphoribosylaminoimidazole-succinocarboxamidesynthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WVP5_9PORP rbh
ar11r2_scaffold_407_14
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14257..14886
DNA (630bp) protein (210aa)
ribonuclease H (EC:3.1.26.4)
Ribonuclease H {ECO:0000313|EMBL:CEN38586.1}; EC=3.1.26.4 {ECO:0000313|EMBL:CEN38586.1};; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
Ribonuclease H n=1 Tax=Capnocytophaga canimorsus (strain 5) RepID=F9YPA1_CAPCC
ar11r2_scaffold_407_trna_1
unknown

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comp(14916..14997)
DNA (82bp)
transferRNA Leu
ar11r2_scaffold_407_15
unknown

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comp(15079..15216)
DNA (138bp) protein (46aa)

This feature has no annotations

ar11r2_scaffold_407_16
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(15356..17125)
DNA (1770bp) protein (590aa)
long chain fatty-acid CoA ligase id=1775377 bin=GWE2_Bacteroidetes_42_24 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes rbh
AMP-dependent synthetase
Tax=GWF2_Bacteroidetes_43_11_curated
ar11r2_scaffold_407_17
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17367..19208
DNA (1842bp) protein (614aa)
2-oxoacid:acceptor oxidoreductase subunit alpha (EC:1.2.7.3) rbh
2-oxoacid:acceptor oxidoreductase, alpha subunit n=2 Tax=Odoribacter RepID=H1DK71_9PORP rbh
2-oxoacid:acceptor oxidoreductase alpha subunit {ECO:0000313|EMBL:CCZ80869.1}; TaxID=1263089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter laneus CAG:561.;"
ar11r2_scaffold_407_18
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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19212..20219
DNA (1008bp) protein (336aa)
2-oxoglutarate synthase (EC:1.2.7.3) rbh
2-oxoglutarate synthase n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6F4R0_9PORP rbh
2-oxoglutarate synthase {ECO:0000313|EMBL:CDB08078.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
ar11r2_scaffold_407_19
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20305..22290
DNA (1986bp) protein (662aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS06871.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
Outer membrane cobalamin receptor protein id=4128571 bin=GWF2_Bacteroidetes_38_335 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
outer membrane cobalamin receptor protein
ar11r2_scaffold_407_20
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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22329..23450
DNA (1122bp) protein (374aa)
Periplasmic binding protein id=3691579 bin=GWF2_Bacteroidetes_33_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good rbh
periplasmic binding protein
Tax=GWE2_Bacteroidetes_32_14_curated
ar11r2_scaffold_407_21
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(23526..24062)
DNA (537bp) protein (179aa)
Transposase n=1 Tax=Psychroflexus torquis (strain ATCC 700755 / ACAM 623) RepID=Q1VPB4_PSYTT
transposase, IS1595/ISH4 family
Tax=GWA2_Bacteroidetes_30_7_curated
Displaying 22 items

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