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ar11r2_scaffold_262

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar11r2_scaffold_262_1
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

3..1151
DNA (1149bp) protein (383aa)
Outer membrane protein/peptidoglycan-associated (Lipo)protein id=1775423 bin=GWE2_Bacteroidetes_42_24 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
outer membrane protein/peptidoglycan-associated (lipo)protein
Tax=CG_Bacteroid_02
ar11r2_scaffold_262_2
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

1290..1934
DNA (645bp) protein (215aa)
Protein grpE id=1950556 bin=GWB2_Bacteroidetes_32_14 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
molecular chaperone GrpE
Tax=BJP_IG2103_Bacteroidetes_37_22
ar11r2_scaffold_262_3
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1980..3134
DNA (1155bp) protein (385aa)
Chaperone protein DnaJ n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2JAR5_9SPHI rbh
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
hypothetical protein rbh
ar11r2_scaffold_262_trna_1
unknown

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3246..3316
DNA (71bp)
transferRNA Gln
ar11r2_scaffold_262_4
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

3436..4725
DNA (1290bp) protein (430aa)
NusA antitermination factor id=2770823 bin=GWF2_Bacteroidetes_41_31 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
NusA antitermination factor rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
ar11r2_scaffold_262_5
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

4796..7882
DNA (3087bp) protein (1029aa)
translation initiation factor IF-2 id=2159720 bin=GWE2_Bacteroidetes_40_63 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good rbh
translation initiation factor IF-2 rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
ar11r2_scaffold_262_6
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

7897..8910
DNA (1014bp) protein (338aa)
4-hydroxythreonine-4-phosphate dehydrogenase id=2209378 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes rbh
4-hydroxythreonine-4-phosphate dehydrogenase
Tax=BJP_IG2103_Bacteroidetes_41_9
ar11r2_scaffold_262_7
CG_Bacteroid_01, Bacteroidetes, Bacteria

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8929..11391
DNA (2463bp) protein (821aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase id=1744935 bin=GWB2_Bacteroidetes_32_14 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47 rbh
bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase rbh
Tax=CG_Bacteroid_01
ar11r2_scaffold_262_8
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

11393..13279
DNA (1887bp) protein (629aa)
Polysaccharide biosynthesis protein CapD id=3249690 bin=GWF2_Bacteroidetes_43_63 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77 rbh
polysaccharide biosynthesis protein CapD rbh
Tax=CG_Bacteroid_01
ar11r2_scaffold_262_9
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13333..14421)
DNA (1089bp) protein (363aa)
Oxidoreductase, 2-nitropropane dioxygenase family n=2 Tax=Thermosipho africanus RepID=B7IH37_THEAB rbh
oxidoreductase, 2-nitropropane dioxygenase family rbh
Tax=BJP_08E140C01_Bacteriodales_41_10
ar11r2_scaffold_262_10
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14559..15398)
DNA (840bp) protein (280aa)
Response regulator receiver protein id=2165196 bin=GWE2_Bacteroidetes_40_63 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
ar11r2_scaffold_262_11
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(15460..16854)
DNA (1395bp) protein (465aa)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I n=1 Tax=Pontibacter sp. BAB1700 RepID=J0V7D6_9BACT rbh
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I {ECO:0000313|EMBL:EJF10052.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
phosphoglucosamine mutase rbh
ar11r2_scaffold_262_12
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16858..17298)
DNA (441bp) protein (147aa)
Probable cytosine/adenosine deaminase id=4080481 bin=GWF2_Bacteroidetes_40_13 species=Flavobacterium indicum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
CMP deaminase
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
ar11r2_scaffold_262_13
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(17378..17857)
DNA (480bp) protein (160aa)
Thioesterase family protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CZF0_BACPM
thioesterase
Tax=BJP_IG2103_Bacteroidetes_41_9
ar11r2_scaffold_262_14
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17973..19763
DNA (1791bp) protein (597aa)
long chain fatty-acid CoA ligase id=3642323 bin=GWF2_Bacteroidetes_33_16 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good rbh
AMP-dependent synthetase
Tax=GWE2_Bacteroidetes_32_14_curated
ar11r2_scaffold_262_15
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

19969..21582
DNA (1614bp) protein (538aa)
Uncharacterized protein id=4315633 bin=GWF2_Bacteroidetes_29_10 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
hypothetical protein
Tax=GWE2_Bacteroidetes_29_8_curated
ar11r2_scaffold_262_16
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(21647..22621)
DNA (975bp) protein (325aa)
Putative uncharacterized protein id=4366499 bin=GWF2_Bacteroidetes_41_31 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
radical SAM protein
Tax=BJP_IG2103_Bacteroidetes_41_9
ar11r2_scaffold_262_17
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(22630..22863)
DNA (234bp) protein (78aa)
ATP synthase subunit epsilon n=1 Tax=Rudanella lutea RepID=UPI000380F727
ATP synthase subunit epsilon
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
ar11r2_scaffold_262_18
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22869..24374)
DNA (1506bp) protein (502aa)
ATP synthase subunit beta id=1739310 bin=GWE2_Bacteroidetes_42_24 species=unknown genus=unknown taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes rbh
ATP synthase F1 subunit beta rbh
Tax=GWF2_Bacteroidetes_43_11_curated
ar11r2_scaffold_262_19
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(24536..24694)
DNA (159bp) protein (53aa)
50S ribosomal protein L34 n=1 Tax=Bacteroides pyogenes F0041 RepID=U2C2S2_9BACE
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1321819 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes F0041.;"
50S ribosomal protein L34
ar11r2_scaffold_262_20
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24754..25452)
DNA (699bp) protein (233aa)
Uncharacterized protein {ECO:0000313|EMBL:KJF45517.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
rRNA methyltransferase
tRNA/rRNA methyltransferase (SpoU) id=2995503 bin=GWF2_Bacteroidetes_35_48 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
ar11r2_scaffold_262_21
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25516..25785)
DNA (270bp) protein (90aa)
histone family protein DNA-binding protein id=4174148 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
bacterial nucleoid protein Hbs
Tax=GWA2_Bacteroidetes_32_17_curated
ar11r2_scaffold_262_22
unknown

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25846..25935
DNA (90bp) protein (30aa)

This feature has no annotations

ar11r2_scaffold_262_23
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(25927..26880)
DNA (954bp) protein (318aa)
Methionyl-tRNA formyltransferase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KRE7_SOLCM rbh
methionyl-tRNA formyltransferase rbh
Tax=CG_Bacteroid_02
ar11r2_scaffold_262_24
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26880..27365)
DNA (486bp) protein (162aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KMW7_SOLCM
6,7-dimethyl-8-ribityllumazine synthase
ar11r2_scaffold_262_25
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27365..28072)
DNA (708bp) protein (236aa)
Putative uncharacterized protein id=4083142 bin=GWF2_Bacteroidetes_40_13 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein
Tax=GWE2_Bacteroidetes_40_63_curated
ar11r2_scaffold_262_26
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(28171..28893)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y1L6_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
ar11r2_scaffold_262_27
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28906..31380)
DNA (2475bp) protein (825aa)
AMP-forming long-chain acyl-CoA synthetase id=3690123 bin=GWF2_Bacteroidetes_33_16 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good rbh
AMP-forming long-chain acyl-CoA synthetase rbh
Tax=GWE2_Bacteroidetes_32_14_curated
ar11r2_scaffold_262_28
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31453..32904)
DNA (1452bp) protein (484aa)
membrane protein involved in aromatic hydrocarbon degradation id=1845500 bin=GWE2_Bacteroidetes_42_42 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good + rbh
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
ar11r2_scaffold_262_29
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

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comp(32931..33791)
DNA (861bp) protein (287aa)
hypothetical protein LOAG_15501, partial n=1 Tax=Loa loa RepID=UPI0001E4540A
Uncharacterized protein {ECO:0000313|EMBL:ESO93343.1}; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
nuclease
Displaying 30 items

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