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ar11r2_scaffold_756

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar11r2_scaffold_756_1
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3..275
DNA (273bp) protein (91aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEA16247.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Transposase IS4 family protein id=4276859 bin=GWF2_Bacteroidetes_40_13 species=Gillisia limnaea genus=Gillisia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
ar11r2_scaffold_756_2
unknown

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634..1203
DNA (570bp) protein (190aa)

This feature has no annotations

ar11r2_scaffold_756_3
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1462..2304
DNA (843bp) protein (281aa)
Uncharacterized protein id=3873292 bin=GWF2_Bacteroidetes_29_10 species=Bacteroides nordii genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
sulfatase-modifying factor protein
Sulphatase-modifying factor protein {ECO:0000313|EMBL:AEE53598.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
ar11r2_scaffold_756_4
Capnocytophaga cynodegmi, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3392..3835
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1LXQ4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CEN32604.1}; TaxID=28189 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga cynodegmi.;"
hypothetical protein
ar11r2_scaffold_756_5
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3882..4310
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5I6Z5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KHM45747.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
hypothetical protein
ar11r2_scaffold_756_6
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(4320..5342)
DNA (1023bp) protein (341aa)
phenylalanyl-tRNA ligase subunit alpha id=3771826 bin=GWF2_Bacteroidetes_40_13 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes rbh
phenylalanyl-tRNA synthetase subunit alpha
Tax=GWE2_Bacteroidetes_40_63_curated
ar11r2_scaffold_756_7
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5356..6090)
DNA (735bp) protein (245aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
peptidylprolyl isomerase n=1 Tax=Pedobacter agri RepID=UPI00029B3DC2
cyclophilin type peptidyl-prolyl cis-trans isomerase
ar11r2_scaffold_756_8
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6258..8021
DNA (1764bp) protein (588aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H7X6_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EHB92575.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Putative hemolysin
ar11r2_scaffold_756_9
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

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8032..8553
DNA (522bp) protein (174aa)
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
Ribosome maturation factor RimM id=2837721 bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
16S rRNA-processing protein RimM
ar11r2_scaffold_756_10
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8546..9286
DNA (741bp) protein (247aa)
tRNA1(Val) (adenine(37)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016413}; EC=2.1.1.223 {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016405};; tRNA m6A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
tRNA1(Val) (adenine(37)-N6)-methyltransferase n=2 Tax=Parabacteroides RepID=N2AX73_9PORP
tRNA (adenine-N(6)-)-methyltransferase
ar11r2_scaffold_756_11
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9311..9862)
DNA (552bp) protein (184aa)
id=3098040 bin=GWF2_Bacteroidetes_43_63 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
Tax=BJP_08E140C01_Bacteriodales_41_10
ar11r2_scaffold_756_12
Parcubacteria bacterium GW2011_GWB1_35_5, Parcubacteria, Bacteria

Not on your lists

comp(9882..10358)
DNA (477bp) protein (159aa)
Dihydrofolate reductase n=1 Tax=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) RepID=E6U2F4_BACCJ
Dihydrofolate reductase {ECO:0000313|EMBL:KKP79773.1}; TaxID=1618861 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_35_5.;"
dihydrofolate reductase subunit
ar11r2_scaffold_756_13
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(10381..11115)
DNA (735bp) protein (245aa)
Gliding motility-associated ABC transporter ATP-binding subunit GldA id=3130329 bin=GWF2_Bacteroidetes_43_63 species=unknown genus=Lacinutrix taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77 rbh
gliding motility-associated ABC transporter ATP-binding subunit GldA rbh
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
ar11r2_scaffold_756_14
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11228..12637
DNA (1410bp) protein (470aa)
adenosylhomocysteinase (EC:3.3.1.1) rbh
Adenosylhomocysteinase n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J2L6_9PORP rbh
Tax=GWF2_Bacteroidetes_35_48_curated
ar11r2_scaffold_756_trna_1
unknown

Not on your lists

12727..12797
DNA (71bp)
transferRNA Cys
ar11r2_scaffold_756_15
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13271..13594
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Riemerella anatipestifer RA-CH-1 RepID=J9QX92_RIEAN
HIRAN domain-containing protein {ECO:0000313|EMBL:CEN43344.1}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
hypothetical protein
ar11r2_scaffold_756_16
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13676..14578
DNA (903bp) protein (301aa)
HTH domain protein n=1 Tax=Bacteroides sp. CAG:98 RepID=R7NK15_9BACE rbh
HTH domain protein
HTH domain protein {ECO:0000313|EMBL:CEA16232.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
ar11r2_scaffold_756_17
Maricaulis maris, Maricaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14640..14954)
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Maricaulis maris (strain MCS10) RepID=Q0ALK6_MARMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI66837.1}; Flags: Precursor;; TaxID=394221 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Maricaulis.;" source="Maricaulis maris (strain MCS10).;"
ar11r2_scaffold_756_18
unknown

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comp(14986..15252)
DNA (267bp) protein (89aa)

This feature has no annotations

ar11r2_scaffold_756_19
unknown

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20621..20815
DNA (195bp) protein (65aa)

This feature has no annotations

ar11r2_scaffold_756_20
Mucinivorans hirudinis, Mucinivorans, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20869..21201)
DNA (333bp) protein (111aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1433126 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Mucinivorans.;" source="Mucinivorans hirudinis.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JGG8_9BACT
CRISPR-associated protein Cas2
ar11r2_scaffold_756_21
Prevotella bivia, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21217..22152)
DNA (936bp) protein (312aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=868129 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella bivia DSM 20514.;"
CRISPR-associated endonuclease Cas1 n=2 Tax=Prevotella bivia RepID=D1XW27_9BACT rbh
hypothetical protein
ar11r2_scaffold_756_22
Fibrobacter succinogenes, Fibrobacter, Fibrobacterales, Fibrobacteria, Fibrobacteres, Bacteria

Not on your lists

comp(22145..25726)
DNA (3582bp) protein (1194aa)
CRISPR-associated endonuclease Cas9 {ECO:0000256|HAMAP-Rule:MF_01480}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01480};; TaxID=59374 species="Bacteria; Fibrobacteres; Fibrobacterales; Fibrobacteraceae; Fibrobacter.;" source="Fibrobacter succinogenes (strain ATCC 19169 / S85).;"
CRISPR-associated protein, Csn1 family n=1 Tax=Fibrobacter succinogenes (strain ATCC 19169 / S85) RepID=C9RJP1_FIBSS rbh
csn1; CRISPR-associated protein, Csn1 family rbh
ar11r2_scaffold_756_23
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25737..26066
DNA (330bp) protein (110aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEA16247.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Transposase IS4 family protein id=1894904 bin=GWD2_Bacteroidetes_40_43 species=Sphingobacterium sp. genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Displaying 24 items

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