ggKbase home page

ALUMROCK_MS11_Chromatiales_related_55_29_curated

ALUMROCK_MS11_Gammaproteobacteria_55_1
In projects: ALUMROCK_MS11  |  alumrock-genomes

Consensus taxonomy: Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 251-300 of 453 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
ar11r2_scaffold_29812
Class: Gammaproteobacteria (75%)
4 1952 bp 56.86 1.00 95.75
ar11r2_scaffold_6165
Class: Gammaproteobacteria (50%)
4 3760 bp 53.83 1.00 82.90
ar11r2_scaffold_14182
Class: Gammaproteobacteria (50%)
4 3491 bp 58.15 1.00 90.23
ar11r2_scaffold_12269
Order: Chromatiales (50%)
4 3831 bp 54.97 1.00 94.28
ar11r2_scaffold_5868
Class: Gammaproteobacteria (50%)
4 3584 bp 57.23 1.00 84.21
ar11r2_scaffold_41051
Species: Halothiobacillus neapolitanus (66.67%)
3 1602 bp 51.87 1.00 89.70
ar11r2_scaffold_7090
Species: Halothiobacillus neapolitanus (66.67%)
3 3135 bp 52.03 1.00 85.26
ar11r2_scaffold_24696
Class: Gammaproteobacteria (100%)
3 1588 bp 54.03 1.00 98.80
ar11r2_scaffold_18015
Class: Gammaproteobacteria (66.67%)
3 2335 bp 57.43 1.00 94.05
ar11r2_scaffold_6986
Species: Halothiobacillus neapolitanus (66.67%)
3 3831 bp 58.47 1.00 95.30
ar11r2_scaffold_4207
Genus: Candidatus Accumulibacter (66.67%)
3 4493 bp 55.31 1.00 94.75
ar11r2_scaffold_39149
Class: Gammaproteobacteria (66.67%)
3 1442 bp 55.13 1.00 91.96
ar11r2_scaffold_42322
Class: Gammaproteobacteria (66.67%)
3 2287 bp 50.11 1.00 68.87
ar11r2_scaffold_5068
Phylum: Proteobacteria (100%)
3 3815 bp 58.30 1.00 95.78
ar11r2_scaffold_8936
Class: Gammaproteobacteria (66.67%)
3 2888 bp 58.76 1.00 83.73
ar11r2_scaffold_9023
Species: Thioalkalivibrio thiocyanoxidans (66.67%)
3 4160 bp 55.89 1.00 86.25
ar11r2_scaffold_12483
Phylum: Proteobacteria (66.67%)
3 2447 bp 52.51 1.00 46.34
ar11r2_scaffold_25382
Order: Chromatiales (66.67%)
3 1749 bp 55.63 1.00 96.40
ar11r2_scaffold_10231
Order: Chromatiales (66.67%)
3 2619 bp 60.25 1.00 96.56
ar11r2_scaffold_26944
Class: Gammaproteobacteria (100%)
3 1732 bp 58.49 1.00 86.26
ar11r2_scaffold_11414
Species: Halothiobacillus neapolitanus (66.67%)
3 3394 bp 54.89 1.00 82.47
ar11r2_scaffold_25893
Phylum: Proteobacteria (66.67%)
3 2171 bp 52.46 1.00 75.45
ar11r2_scaffold_17735
Class: Gammaproteobacteria (66.67%)
3 1861 bp 51.64 1.00 78.99
ar11r2_scaffold_26373
Order: Chromatiales (66.67%)
3 2704 bp 53.59 1.00 84.65
ar11r2_scaffold_23777 3 1473 bp 52.14 1.00 47.66
ar11r2_scaffold_24254
Class: Gammaproteobacteria (66.67%)
3 2413 bp 54.29 1.00 93.24
ar11r2_scaffold_32697
Class: Gammaproteobacteria (100%)
3 2254 bp 51.46 1.00 72.27
ar11r2_scaffold_15320
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2144 bp 54.57 1.00 93.89
ar11r2_scaffold_20388
Species: Thiocystis violascens (66.67%)
3 1762 bp 57.49 1.00 101.13
ar11r2_scaffold_12235
Class: Gammaproteobacteria (66.67%)
3 2601 bp 50.56 1.00 99.65
ar11r2_scaffold_42142 3 1076 bp 47.21 1.00 63.85
ar11r2_scaffold_12230
Class: Gammaproteobacteria (100%)
3 2638 bp 53.64 1.00 83.36
ar11r2_scaffold_36839
Order: Chromatiales (66.67%)
3 1587 bp 57.03 1.00 91.68
ar11r2_scaffold_12651
Species: Halothiobacillus neapolitanus (66.67%)
3 2608 bp 53.57 1.00 98.93
ar11r2_scaffold_5525
Genus: Thioalkalivibrio (66.67%)
3 3863 bp 58.79 1.00 94.43
ar11r2_scaffold_25104
Class: Gammaproteobacteria (100%)
3 2005 bp 56.01 1.00 100.25
ar11r2_scaffold_12579
Species: Halothiobacillus neapolitanus (66.67%)
3 2714 bp 52.39 1.00 97.61
ar11r2_scaffold_30540
Class: Gammaproteobacteria (66.67%)
3 1514 bp 55.02 1.00 89.56
ar11r2_scaffold_17677
Class: Gammaproteobacteria (66.67%)
3 2075 bp 57.73 1.00 98.17
ar11r2_scaffold_33689
Order: Chromatiales (66.67%)
3 1917 bp 55.71 1.00 90.45
ar11r2_scaffold_23376
Order: Chromatiales (66.67%)
3 1682 bp 56.54 1.00 100.42
ar11r2_scaffold_28622
Species: Halothiobacillus neapolitanus (66.67%)
3 3578 bp 54.81 1.00 93.82
ar11r2_scaffold_10772
Class: Gammaproteobacteria (66.67%)
3 2546 bp 52.20 1.00 49.61
ar11r2_scaffold_7083
Order: Chromatiales (100%)
3 3165 bp 55.39 1.00 96.78
ar11r2_scaffold_15954
Class: Gammaproteobacteria (66.67%)
3 2184 bp 55.77 1.00 89.29
ar11r2_scaffold_6080
Class: Gammaproteobacteria (66.67%)
3 3655 bp 58.14 1.00 87.82
ar11r2_scaffold_8401
Phylum: Proteobacteria (66.67%)
3 3307 bp 53.73 1.00 78.29
ar11r2_scaffold_15485
Domain: Bacteria (100%)
3 2048 bp 58.40 1.00 90.82
ar11r2_scaffold_5551
Phylum: Proteobacteria (66.67%)
3 3797 bp 52.57 1.00 95.05
ar11r2_scaffold_16662 3 2127 bp 53.78 1.00 55.29
Displaying items 251-300 of 453 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.