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ar11r2_scaffold_311

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar11r2_scaffold_311_1
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(372..1259)
DNA (888bp) protein (296aa)
acetylglutamate kinase (EC:2.7.2.8) rbh
Acetylglutamate kinase {ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.- {ECO:0000256|SAAS:SAAS00277142};; EC=2.7.2.8 {ECO:0000256|SAAS:SAAS00245383};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Acetylglutamate kinase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KWP5_HALNC rbh
ar11r2_scaffold_311_2
Rahnella aquatilis, Rahnella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1286..1741)
DNA (456bp) protein (152aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1151116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Rahnella.;" source="Rahnella aquatilis HX2.;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Rahnella RepID=E8XNH8_RAHSY
ar11r2_scaffold_311_3
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1722..2984)
DNA (1263bp) protein (421aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G4M1_9GAMM rbh
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:EHQ52758.1}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
phosphopantothenoylcysteine decarboxylase
ar11r2_scaffold_311_4
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3137..3811
DNA (675bp) protein (225aa)
DNA repair protein RadC n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DSY0_THIND rbh
radC_[C]; DNA repair protein RadC rbh
DNA repair protein RadC {ECO:0000313|EMBL:AGA32102.1}; TaxID=1255043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
ar11r2_scaffold_311_5
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3861..4517)
DNA (657bp) protein (219aa)
Outer membrane lipoprotein containing OmpA/MotB domain n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P7J9_AROAE
outer membrane lipoprotein
Outer membrane lipoprotein containing OmpA/MotB domain {ECO:0000313|EMBL:CAI06712.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
ar11r2_scaffold_311_6
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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4884..6107
DNA (1224bp) protein (408aa)
Patatin n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YWG1_DESAF rbh
patatin rbh
Patatin {ECO:0000313|EMBL:EGJ49347.1}; Flags: Precursor;; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
ar11r2_scaffold_311_7
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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6259..8157
DNA (1899bp) protein (633aa)
ABC transporter ATP-binding protein n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6CGW4_9GAMM rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AKH20952.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
ABC transporter ATP-binding protein
ar11r2_scaffold_311_8
Nitrincola sp. AK23, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8443..9405)
DNA (963bp) protein (321aa)
Uncharacterized protein {ECO:0000313|EMBL:EXJ12352.1}; TaxID=1229521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. AK23.;"
ar11r2_scaffold_311_9
unknown

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comp(9444..9605)
DNA (162bp) protein (54aa)

This feature has no annotations

ar11r2_scaffold_311_10
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9642..10124)
DNA (483bp) protein (161aa)
Probable chorismate pyruvate-lyase {ECO:0000256|HAMAP-Rule:MF_01632}; Short=CL {ECO:0000256|HAMAP-Rule:MF_01632};; Short=CPL {ECO:0000256|HAMAP-Rule:MF_01632};; EC=4.1.3.40 {ECO:0000256|HAMAP-Rule:MF_01632};; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
Probable chorismate pyruvate-lyase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQS9_9GAMM
ar11r2_scaffold_311_11
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10308..12236
DNA (1929bp) protein (643aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQN9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIJ33682.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
putative phosphatase
ar11r2_scaffold_311_12
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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12360..14423
DNA (2064bp) protein (688aa)
PDZ/DHR/GLGF domain protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQN8_9GAMM rbh
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar11r2_scaffold_311_13
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14479..16518)
DNA (2040bp) protein (680aa)
ATP-dependent DNA helicase RecG (EC:3.6.1.-) rbh
ATP-dependent DNA helicase RecG n=1 Tax=Rhodanobacter denitrificans RepID=I4WVX4_9GAMM rbh
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar11r2_scaffold_311_14
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16629..18470)
DNA (1842bp) protein (614aa)
NAD pyrophosphatase/5'-nucleotidase NadN n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQ84_9GAMM rbh
NAD pyrophosphatase/5'-nucleotidase NadN {ECO:0000313|EMBL:EIJ33527.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
metallophosphatase
ar11r2_scaffold_311_15
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18717..19895
DNA (1179bp) protein (393aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E875_GEOLS rbh
Uncharacterized protein {ECO:0000313|EMBL:AKH37981.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
RND family efflux transporter MFP subunit rbh
ar11r2_scaffold_311_16
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19934..23065
DNA (3132bp) protein (1044aa)
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E876_GEOLS rbh
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:ACD95113.1}; Flags: Precursor;; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter rbh
ar11r2_scaffold_311_17
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23055..24530
DNA (1476bp) protein (492aa)
Type I secretion outer membrane protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LRD6_SYNAS rbh
Uncharacterized protein {ECO:0000313|EMBL:AKH37982.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
type I secretion outer membrane protein rbh
ar11r2_scaffold_311_18
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24935..25864
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BUU9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIJ35142.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein rbh
ar11r2_scaffold_311_19
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25909..26337)
DNA (429bp) protein (143aa)
Host cell attachment-required protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GQU9_THISH
host cell attachment-required protein
Host cell attachment-required protein {ECO:0000313|EMBL:ACL72369.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
ar11r2_scaffold_311_20
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26498..27616)
DNA (1119bp) protein (373aa)
Chromosome partitioning ATPase id=2750032 bin=GWF1_Xanthomonadales_69_6 species=Rhodanobacter sp. 115 genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
mrP protein rbh
Tax=GWF1_Xanthomonadales_69_6_curated
ar11r2_scaffold_311_21
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


27907..29952
DNA (2046bp) protein (682aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001329}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
Methionine--tRNA ligase n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DMN1_9GAMM rbh
ar11r2_scaffold_311_22
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29949..30620
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1S0_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96643.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ar11r2_scaffold_311_23

Not on your lists

30693..33365
DNA (2673bp) protein (891aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QUW7_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CBI11040.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
SMC domain protein rbh
ar11r2_scaffold_311_24
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33377..34618
DNA (1242bp) protein (414aa)
Putative transcriptional regulator n=1 Tax=Azoarcus sp. KH32C RepID=H0PYV4_9RHOO rbh
putative transcriptional regulator rbh
Putative transcriptional regulator {ECO:0000313|EMBL:BAL23491.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
ar11r2_scaffold_311_25
Acetobacter aceti, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(35125..35619)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Acetobacter aceti RepID=UPI0002260739
Uncharacterized protein {ECO:0000313|EMBL:GAN58939.1}; TaxID=887700 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; Acetobacter subgen. Acetobacter.;" source="Acetobacter aceti NBRC 14818.;"
ar11r2_scaffold_311_26
unknown

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comp(35616..35756)
DNA (141bp) protein (47aa)

This feature has no annotations

Displaying 26 items

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